Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm24164-201ENSMUST00000093663 104 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim28Q62318 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim28Q62318 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Trim28Q62318 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Trim28Q62318 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim28Q62318 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Snora36b-201ENSMUST00000104383 132 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm23492-201ENSMUST00000116837 115 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm15183-201ENSMUST00000118933 348 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm23586-201ENSMUST00000157657 123 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm24010-201ENSMUST00000157731 282 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm23260-201ENSMUST00000158317 172 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm16561-201ENSMUST00000163001 192 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm37377-201ENSMUST00000191733 304 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm23370-202ENSMUST00000197008 129 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm42774-201ENSMUST00000198854 283 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm24355-201ENSMUST00000082858 122 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm10172-201ENSMUST00000085929 558 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Gm23947-201ENSMUST00000093636 107 ntBASIC3.04□□□□□ -1.92
Trim28Q62318 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim28Q62318 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim28Q62318 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim28Q62318 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Trim28Q62318 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim28Q62318 Mir450b-201ENSMUST00000102095 82 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim28Q62318 Gm23320-201ENSMUST00000104462 127 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm13433-201ENSMUST00000121701 240 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm23599-201ENSMUST00000157261 251 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm22212-201ENSMUST00000158096 106 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm17113-201ENSMUST00000170118 171 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm27271-201ENSMUST00000183509 170 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm29553-201ENSMUST00000189692 279 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Trbv6-201ENSMUST00000193743 276 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Gm45288-201ENSMUST00000210236 151 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.03□□□□□ -1.92
Trim28Q62318 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Trim28Q62318 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim28Q62318 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim28Q62318 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC3.02□□□□□ -1.93
Trim28Q62318 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Trim28Q62318 Gm22051-201ENSMUST00000117002 127 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm15714-201ENSMUST00000117168 250 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm12926-201ENSMUST00000121158 409 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm22213-201ENSMUST00000157564 119 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm22316-201ENSMUST00000158012 216 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm26200-201ENSMUST00000180273 79 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Mir6386-201ENSMUST00000183558 104 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm45543-201ENSMUST00000209327 88 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm45492-201ENSMUST00000211611 288 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm23462-201ENSMUST00000083264 104 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Snora2b-201ENSMUST00000084005 137 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Gm24163-201ENSMUST00000093660 132 ntBASIC3.02□□□□□ -1.93
Trim28Q62318 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim28Q62318 Gm22148-201ENSMUST00000104445 107 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm9009-201ENSMUST00000117321 326 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm14215-201ENSMUST00000120578 221 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm24716-201ENSMUST00000157524 104 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm22845-201ENSMUST00000157712 104 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm22557-201ENSMUST00000157804 102 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm33866-201ENSMUST00000196911 289 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC3.01□□□□□ -1.93
Trim28Q62318 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.01□□□□□ -1.93
Trim28Q62318 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trim28Q62318 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trim28Q62318 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim28Q62318 Gm25094-201ENSMUST00000103992 131 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm25485-201ENSMUST00000104120 132 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm14402-201ENSMUST00000122217 508 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm23644-201ENSMUST00000157856 77 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm22967-201ENSMUST00000157956 239 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm22075-201ENSMUST00000158599 192 ntBASIC3□□□□□ -1.93
Trim28Q62318 Mir8103-201ENSMUST00000183945 107 ntBASIC3□□□□□ -1.93
Trim28Q62318 Mir7050-201ENSMUST00000184636 60 ntBASIC3□□□□□ -1.93
Trim28Q62318 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm10400-201ENSMUST00000203920 3835 ntBASIC3□□□□□ -1.93
Trim28Q62318 Gm45116-201ENSMUST00000207392 275 ntBASIC3□□□□□ -1.93
Trim28Q62318 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trim28Q62318 Gm22270-201ENSMUST00000104034 132 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm22779-201ENSMUST00000104085 107 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm26249-201ENSMUST00000116708 118 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm23551-201ENSMUST00000116852 121 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm14629-201ENSMUST00000122428 144 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm24141-201ENSMUST00000122776 115 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm23559-201ENSMUST00000157824 103 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm22517-201ENSMUST00000158265 136 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm23005-201ENSMUST00000158950 136 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm44352-201ENSMUST00000196358 110 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim28Q62318 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Mir488-201ENSMUST00000093595 109 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.99□□□□□ -1.93
Trim28Q62318 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
Trim28Q62318 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.98□□□□□ -1.93
Trim28Q62318 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 107.3 ms