Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.49□□□□□ -2.33
Trav2Q5R1I9 Gm14803-201ENSMUST00000117163 361 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm11334-201ENSMUST00000121969 156 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm22482-201ENSMUST00000122563 359 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm22279-201ENSMUST00000157200 93 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm25884-201ENSMUST00000157782 62 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm24191-201ENSMUST00000157977 122 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm22631-201ENSMUST00000179656 94 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm36956-201ENSMUST00000193830 214 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm44142-201ENSMUST00000203358 311 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.48□□□□□ -2.33
Trav2Q5R1I9 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm26314-201ENSMUST00000083891 107 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 AC133079.1-201ENSMUST00000220943 1881 ntBASIC0.48□□□□□ -2.33
Trav2Q5R1I9 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Mir496b-201ENSMUST00000184935 113 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Gm37869-201ENSMUST00000193385 595 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Gm18213-201ENSMUST00000207850 178 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Snord68-201ENSMUST00000082516 86 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.47□□□□□ -2.33
Trav2Q5R1I9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm23523-201ENSMUST00000180190 107 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm27793-201ENSMUST00000183405 76 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm27236-201ENSMUST00000184147 442 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm28917-201ENSMUST00000187294 237 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm28766-201ENSMUST00000191086 234 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm43898-201ENSMUST00000204456 424 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 CT009718.4-201ENSMUST00000221881 109 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm23055-201ENSMUST00000082805 94 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm23731-201ENSMUST00000083749 107 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC0.46□□□□□ -2.34
Trav2Q5R1I9 Gm26384-201ENSMUST00000102183 110 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm23130-201ENSMUST00000104252 74 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm22545-201ENSMUST00000104350 132 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Mir872-201ENSMUST00000104728 81 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm27385-201ENSMUST00000184747 104 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm37918-201ENSMUST00000192071 120 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm37438-201ENSMUST00000192813 393 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm34015-201ENSMUST00000194908 451 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm44921-201ENSMUST00000205290 301 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm44976-201ENSMUST00000205543 261 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
Trav2Q5R1I9 AC164297.3-201ENSMUST00000224238 94 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.45□□□□□ -2.34
Trav2Q5R1I9 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Gm26377-201ENSMUST00000102184 108 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Mir15a-201ENSMUST00000175266 84 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Gm25750-201ENSMUST00000175483 112 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Gm18417-201ENSMUST00000176564 648 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Gm38060-201ENSMUST00000194822 464 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Gm35558-203ENSMUST00000222264 204 ntBASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.44□□□□□ -2.34
Trav2Q5R1I9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
Trav2Q5R1I9 Gm13577-201ENSMUST00000121365 205 ntBASIC0.43□□□□□ -2.34
Trav2Q5R1I9 Gm27817-201ENSMUST00000184302 233 ntBASIC0.43□□□□□ -2.34
Trav2Q5R1I9 AC121844.1-201ENSMUST00000218706 137 ntBASIC0.43□□□□□ -2.34
Trav2Q5R1I9 Gm22884-201ENSMUST00000083127 140 ntBASIC0.43□□□□□ -2.34
Trav2Q5R1I9 Gm24523-201ENSMUST00000083965 132 ntBASIC0.43□□□□□ -2.34
Trav2Q5R1I9 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Mir701-201ENSMUST00000102208 109 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm23060-201ENSMUST00000102345 109 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm25416-201ENSMUST00000104221 107 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm22796-201ENSMUST00000157234 106 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm22945-201ENSMUST00000158557 157 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm22704-201ENSMUST00000083027 137 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.42□□□□□ -2.34
Trav2Q5R1I9 Gm14296-202ENSMUST00000108931 750 ntBASIC0.41□□□□□ -2.34
Trav2Q5R1I9 Gm11254-201ENSMUST00000122368 653 ntBASIC0.41□□□□□ -2.34
Trav2Q5R1I9 Gm24385-201ENSMUST00000122694 350 ntBASIC0.41□□□□□ -2.34
Trav2Q5R1I9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.41□□□□□ -2.34
Trav2Q5R1I9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC0.41□□□□□ -2.34
Trav2Q5R1I9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms