Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 4930522L14Rik-202ENSMUST00000112547 2001 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
Trav6d-4Q5R1I0 Gm13729-201ENSMUST00000120328 406 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25783-201ENSMUST00000122525 190 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25253-201ENSMUST00000179958 107 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm23862-201ENSMUST00000180342 94 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm28001-201ENSMUST00000183561 117 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm29848-201ENSMUST00000203107 295 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm44948-201ENSMUST00000209050 149 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 AC164304.1-201ENSMUST00000226920 272 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24527-201ENSMUST00000082920 107 ntBASIC-0.23□□□□□ -2.45
Trav6d-4Q5R1I0 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm23036-201ENSMUST00000157885 99 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25300-201ENSMUST00000175284 84 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25874-201ENSMUST00000178030 79 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm27236-201ENSMUST00000184147 442 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm44870-201ENSMUST00000207291 357 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 AC130821.1-201ENSMUST00000221997 293 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 AC098718.1-201ENSMUST00000226166 175 ntBASIC-0.24□□□□□ -2.45
Trav6d-4Q5R1I0 Mir672-201ENSMUST00000102331 100 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25563-201ENSMUST00000104603 74 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm14599-201ENSMUST00000120469 474 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm16053-201ENSMUST00000120511 188 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Mir1936-201ENSMUST00000158699 93 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm22290-201ENSMUST00000177655 107 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm43556-201ENSMUST00000196186 681 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Mir490-201ENSMUST00000093567 84 ntBASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC-0.25□□□□□ -2.45
Trav6d-4Q5R1I0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Gm15289-201ENSMUST00000117793 244 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 n-R5s6-201ENSMUST00000122663 88 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Gm27942-201ENSMUST00000184669 101 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24045-201ENSMUST00000083113 98 ntBASIC-0.26□□□□□ -2.45
Trav6d-4Q5R1I0 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25497-201ENSMUST00000104425 132 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm16032-201ENSMUST00000118534 168 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm14765-201ENSMUST00000121954 326 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm13368-201ENSMUST00000122443 430 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24439-201ENSMUST00000157894 117 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24500-201ENSMUST00000158447 124 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm3027-201ENSMUST00000167579 451 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm23055-201ENSMUST00000082805 94 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Mir155-201ENSMUST00000083463 65 ntBASIC-0.27□□□□□ -2.45
Trav6d-4Q5R1I0 Gm22935-201ENSMUST00000103960 104 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Mir654-201ENSMUST00000104787 84 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25980-201ENSMUST00000157176 218 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm20391-201ENSMUST00000174722 106 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm28414-201ENSMUST00000190111 294 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm24616-201ENSMUST00000083274 139 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm22743-201ENSMUST00000083445 133 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25896-201ENSMUST00000083713 136 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Gm25651-201ENSMUST00000083782 119 ntBASIC-0.28□□□□□ -2.45
Trav6d-4Q5R1I0 Mir709-201ENSMUST00000102190 88 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm14931-201ENSMUST00000111079 253 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm15061-201ENSMUST00000121076 1046 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23024-201ENSMUST00000158770 292 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24084-201ENSMUST00000175173 137 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm20689-201ENSMUST00000176033 279 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm37715-201ENSMUST00000193206 235 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24456-201ENSMUST00000083198 107 ntBASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC-0.29□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25313-201ENSMUST00000101817 116 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm7916-201ENSMUST00000120325 456 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm14392-201ENSMUST00000120332 401 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm12105-201ENSMUST00000120846 779 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm14413-201ENSMUST00000122158 408 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23287-201ENSMUST00000179427 116 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm23143-201ENSMUST00000180137 116 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm32300-201ENSMUST00000221735 515 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm24871-201ENSMUST00000083099 116 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Snord85-201ENSMUST00000083262 73 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Gm25513-201ENSMUST00000083861 162 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 Rnu5g-201ENSMUST00000093721 116 ntBASIC-0.3□□□□□ -2.46
Trav6d-4Q5R1I0 AC154515.1-201ENSMUST00000226085 2841 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms