Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Gm22556-201ENSMUST00000157803 100 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Gm23191-201ENSMUST00000179147 107 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Mir155-201ENSMUST00000083463 65 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Gm24431-201ENSMUST00000104073 66 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm23705-201ENSMUST00000104370 130 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm25831-201ENSMUST00000158924 163 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm27420-201ENSMUST00000183823 79 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Mir6380-201ENSMUST00000184334 81 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm43427-201ENSMUST00000198188 331 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm23055-201ENSMUST00000082805 94 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm23721-201ENSMUST00000083005 107 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm24163-201ENSMUST00000093660 132 ntBASIC0.78□□□□□ -2.28
Trav3-3Q5R1C3 Gm11859-201ENSMUST00000118099 455 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm16358-201ENSMUST00000146046 210 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm22802-201ENSMUST00000175621 89 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm23660-201ENSMUST00000178362 79 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm24088-201ENSMUST00000179100 79 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm24638-201ENSMUST00000179807 132 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm27539-201ENSMUST00000184971 224 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm28344-201ENSMUST00000185704 279 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm28661-201ENSMUST00000188231 681 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm29022-201ENSMUST00000190702 225 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm18291-201ENSMUST00000190791 301 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm9795-201ENSMUST00000062156 693 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm24966-201ENSMUST00000082443 79 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm23627-201ENSMUST00000082459 107 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm22502-201ENSMUST00000082488 107 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm22977-201ENSMUST00000082615 107 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm24149-201ENSMUST00000082757 107 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm24252-201ENSMUST00000083700 132 ntBASIC0.77□□□□□ -2.29
Trav3-3Q5R1C3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm25909-201ENSMUST00000157619 121 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm23083-201ENSMUST00000157851 116 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm24853-201ENSMUST00000158026 121 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm23893-201ENSMUST00000158106 134 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm26029-201ENSMUST00000158659 132 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm27419-201ENSMUST00000184576 109 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm44358-201ENSMUST00000196301 98 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Gm25650-201ENSMUST00000083784 162 ntBASIC0.76□□□□□ -2.29
Trav3-3Q5R1C3 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Gm23013-201ENSMUST00000104146 106 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Gm22545-201ENSMUST00000104350 132 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Gm12433-201ENSMUST00000119659 255 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Gm27545-201ENSMUST00000184755 202 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Gm3867-201ENSMUST00000086108 279 ntBASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.75□□□□□ -2.29
Trav3-3Q5R1C3 Gm43877-201ENSMUST00000205029 2238 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm25011-201ENSMUST00000158398 126 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm23114-201ENSMUST00000158478 117 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm23059-201ENSMUST00000158978 107 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm27974-201ENSMUST00000183415 105 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm44325-201ENSMUST00000196757 77 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm44301-201ENSMUST00000200362 143 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 AC130829.3-201ENSMUST00000222735 154 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Gm25851-201ENSMUST00000082794 107 ntBASIC0.74□□□□□ -2.29
Trav3-3Q5R1C3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Gm22985-201ENSMUST00000122754 116 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Gm25750-201ENSMUST00000175483 112 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Gm38323-201ENSMUST00000192450 210 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Gm44811-201ENSMUST00000209120 228 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Mir32-201ENSMUST00000083610 70 ntBASIC0.73□□□□□ -2.29
Trav3-3Q5R1C3 Gm23142-201ENSMUST00000101848 105 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm26240-201ENSMUST00000101893 105 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm22689-201ENSMUST00000102452 110 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm22780-201ENSMUST00000104084 132 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm25832-201ENSMUST00000104140 130 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm22544-201ENSMUST00000104349 127 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm14846-201ENSMUST00000121868 216 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm11334-201ENSMUST00000121969 156 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm26004-201ENSMUST00000158804 116 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Mir6381-201ENSMUST00000183426 87 ntBASIC0.72□□□□□ -2.29
Trav3-3Q5R1C3 Mir7063-201ENSMUST00000184158 91 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms