Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm25895-201ENSMUST00000083714 100 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm10351-201ENSMUST00000087694 125 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.34□□□□□ -2.04
Col28a1Q2UY11 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Mir466b-3-201ENSMUST00000103806 81 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm26293-201ENSMUST00000104170 84 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm25866-201ENSMUST00000158245 112 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm22476-201ENSMUST00000158902 100 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Mir3075-201ENSMUST00000175340 85 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Ighv15-1-201ENSMUST00000194450 276 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm15235-201ENSMUST00000200572 194 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm43264-201ENSMUST00000202284 325 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm22978-201ENSMUST00000082607 160 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Snord104-201ENSMUST00000083192 70 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Gm24453-201ENSMUST00000083346 76 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Mir127-201ENSMUST00000093568 70 ntBASIC2.33□□□□□ -2.04
Col28a1Q2UY11 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Mir767-201ENSMUST00000103256 107 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm24582-201ENSMUST00000103967 103 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm24670-201ENSMUST00000104154 132 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm27396-201ENSMUST00000157708 58 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm24210-201ENSMUST00000158263 133 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm16584-201ENSMUST00000159267 189 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm7258-201ENSMUST00000179317 300 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm27869-201ENSMUST00000184327 122 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm6060-201ENSMUST00000188671 251 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm33866-201ENSMUST00000196911 289 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Mir7232-201ENSMUST00000197929 74 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm25815-201ENSMUST00000082755 107 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm25789-201ENSMUST00000083294 76 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Mir423-201ENSMUST00000083584 109 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.32□□□□□ -2.04
Col28a1Q2UY11 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm26249-201ENSMUST00000116708 118 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm12926-201ENSMUST00000121158 409 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm24892-201ENSMUST00000122747 104 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm24056-201ENSMUST00000158617 146 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm16546-201ENSMUST00000159442 355 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Mir6905-201ENSMUST00000184228 70 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Mir21b-201ENSMUST00000184317 108 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm6801-201ENSMUST00000190697 339 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Trbv18-201ENSMUST00000194256 294 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm43199-201ENSMUST00000200019 307 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Gm45116-201ENSMUST00000207392 275 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.31□□□□□ -2.04
Col28a1Q2UY11 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col28a1Q2UY11 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm24276-201ENSMUST00000102181 110 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm26015-201ENSMUST00000104402 125 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm23803-201ENSMUST00000104610 132 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm24440-201ENSMUST00000157236 63 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm24601-201ENSMUST00000157970 143 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm26482-201ENSMUST00000158015 62 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm7592-201ENSMUST00000160674 627 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm24512-201ENSMUST00000174963 65 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm22192-201ENSMUST00000175128 85 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm24304-201ENSMUST00000177635 107 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Mir6399-201ENSMUST00000184050 84 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm27582-201ENSMUST00000184084 126 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm29603-201ENSMUST00000186792 334 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm45445-201ENSMUST00000209586 232 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm22299-201ENSMUST00000082663 136 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm25632-201ENSMUST00000083112 85 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Gm24616-201ENSMUST00000083274 139 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col28a1Q2UY11 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.3□□□□□ -2.04
Col28a1Q2UY11 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm22148-201ENSMUST00000104445 107 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm12449-201ENSMUST00000117572 234 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm26280-201ENSMUST00000157096 101 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm25961-201ENSMUST00000157174 135 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm22349-201ENSMUST00000157864 107 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm23044-201ENSMUST00000157891 100 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm26403-201ENSMUST00000158500 105 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm22139-201ENSMUST00000158747 105 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm37037-201ENSMUST00000194475 424 ntBASIC2.29□□□□□ -2.04
Col28a1Q2UY11 Gm26265-202ENSMUST00000196326 133 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms