Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm27245-201ENSMUST00000184385 376 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Trbv6-201ENSMUST00000193743 276 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm43911-201ENSMUST00000203097 76 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm44052-201ENSMUST00000203382 396 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.65□□□□□ -1.82
Col17a1Q07563 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Col17a1Q07563 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Col17a1Q07563 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm22330-201ENSMUST00000158068 115 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm24212-201ENSMUST00000158258 132 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm22517-201ENSMUST00000158265 136 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm25976-201ENSMUST00000158695 130 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm23005-201ENSMUST00000158950 136 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm29308-201ENSMUST00000188863 315 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm28537-201ENSMUST00000189026 315 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm29631-201ENSMUST00000191065 315 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.65□□□□□ -1.83
Col17a1Q07563 AC164629.4-201ENSMUST00000218505 3247 ntBASIC3.65□□□□□ -1.83
Col17a1Q07563 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm22373-201ENSMUST00000104584 89 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm13432-201ENSMUST00000118861 241 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm13862-201ENSMUST00000121220 197 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm26275-201ENSMUST00000157101 268 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm27733-201ENSMUST00000184803 68 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm6651-201ENSMUST00000189471 271 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm44563-201ENSMUST00000207958 178 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm22950-201ENSMUST00000082776 107 ntBASIC3.64□□□□□ -1.83
Col17a1Q07563 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.64□□□□□ -1.83
Col17a1Q07563 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm25090-201ENSMUST00000104000 132 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm23320-201ENSMUST00000104462 127 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm16546-201ENSMUST00000159442 355 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm22129-201ENSMUST00000179034 107 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm23410-201ENSMUST00000179967 107 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm27672-201ENSMUST00000183751 204 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm27443-201ENSMUST00000184660 98 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm42844-201ENSMUST00000200355 112 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm45445-201ENSMUST00000209586 232 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm22306-201ENSMUST00000082692 107 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm25698-201ENSMUST00000082897 107 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm22505-201ENSMUST00000082956 108 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm22363-201ENSMUST00000083100 108 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm23814-201ENSMUST00000083230 102 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm22294-201ENSMUST00000083308 104 ntBASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Col17a1Q07563 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Col17a1Q07563 Gm24172-201ENSMUST00000104127 117 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm22496-201ENSMUST00000104493 88 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm25889-201ENSMUST00000157775 107 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm22476-201ENSMUST00000158902 100 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Mir5098-201ENSMUST00000175320 82 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm44324-201ENSMUST00000198517 135 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm44182-201ENSMUST00000204052 115 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm26495-201ENSMUST00000083152 137 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm23650-201ENSMUST00000083355 70 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm25409-201ENSMUST00000083764 131 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Gm6185-201ENSMUST00000193379 3553 ntBASIC3.62□□□□□ -1.83
Col17a1Q07563 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col17a1Q07563 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm26051-201ENSMUST00000104642 93 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm11785-201ENSMUST00000120165 601 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm26195-201ENSMUST00000175035 101 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm24084-201ENSMUST00000175173 137 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm38298-201ENSMUST00000193578 118 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm45492-201ENSMUST00000211611 288 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm22245-201ENSMUST00000082479 103 ntBASIC3.61□□□□□ -1.83
Col17a1Q07563 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm14073-201ENSMUST00000117344 381 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm12926-201ENSMUST00000121158 409 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm24141-201ENSMUST00000122776 115 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm27761-201ENSMUST00000184091 131 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 AC157772.2-201ENSMUST00000228202 259 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col17a1Q07563 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm22469-201ENSMUST00000104118 133 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Mir294-201ENSMUST00000104710 84 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm12432-201ENSMUST00000119540 186 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm23434-201ENSMUST00000157179 100 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm26104-201ENSMUST00000157250 108 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm22225-201ENSMUST00000157358 278 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm26411-201ENSMUST00000157668 107 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm25444-201ENSMUST00000158999 113 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm22070-201ENSMUST00000178475 107 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Mir7679-201ENSMUST00000183379 63 ntBASIC3.6□□□□□ -1.83
Col17a1Q07563 Gm38311-201ENSMUST00000192945 165 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 162 ms