Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.84□□□□□ -1.79
Col9a1Q05722 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.84□□□□□ -1.79
Col9a1Q05722 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.84□□□□□ -1.79
Col9a1Q05722 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Col9a1Q05722 Gm15272-201ENSMUST00000120865 233 ntBASIC3.84□□□□□ -1.79
Col9a1Q05722 Gm7618-201ENSMUST00000121643 171 ntBASIC3.84□□□□□ -1.79
Col9a1Q05722 Gm25950-201ENSMUST00000175331 100 ntBASIC3.84□□□□□ -1.79
Col9a1Q05722 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.84□□□□□ -1.79
Col9a1Q05722 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.84□□□□□ -1.79
Col9a1Q05722 Gm26326-201ENSMUST00000083070 129 ntBASIC3.84□□□□□ -1.79
Col9a1Q05722 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Col9a1Q05722 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
Col9a1Q05722 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
Col9a1Q05722 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Col9a1Q05722 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.84□□□□□ -1.8
Col9a1Q05722 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
Col9a1Q05722 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Col9a1Q05722 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col9a1Q05722 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm24096-201ENSMUST00000103905 110 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm23234-201ENSMUST00000157304 134 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm24691-201ENSMUST00000157762 140 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm24958-201ENSMUST00000158009 97 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm24573-201ENSMUST00000175499 112 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Gm44482-201ENSMUST00000199232 103 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.83□□□□□ -1.8
Col9a1Q05722 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Col9a1Q05722 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col9a1Q05722 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col9a1Q05722 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col9a1Q05722 Mir1187-201ENSMUST00000116936 122 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Gm23588-201ENSMUST00000157659 99 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Mir5118-201ENSMUST00000175551 67 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Mir6928-201ENSMUST00000185166 70 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col9a1Q05722 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.82□□□□□ -1.8
Col9a1Q05722 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC3.82□□□□□ -1.8
Col9a1Q05722 AC098718.1-201ENSMUST00000226166 175 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Gm24527-201ENSMUST00000082920 107 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Mir202-201ENSMUST00000083568 72 ntBASIC3.82□□□□□ -1.8
Col9a1Q05722 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Col9a1Q05722 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col9a1Q05722 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm13386-201ENSMUST00000117677 124 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm23898-201ENSMUST00000158111 103 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm22387-201ENSMUST00000158191 131 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Mir1950-201ENSMUST00000158526 74 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm25447-201ENSMUST00000158997 128 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Mir3965-201ENSMUST00000175570 69 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm43977-201ENSMUST00000203970 189 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.81□□□□□ -1.8
Col9a1Q05722 Gm23056-201ENSMUST00000082803 111 ntBASIC3.81□□□□□ -1.8
Col9a1Q05722 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col9a1Q05722 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col9a1Q05722 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col9a1Q05722 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm44240-201ENSMUST00000204015 2654 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col9a1Q05722 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col9a1Q05722 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col9a1Q05722 Mir676-201ENSMUST00000102443 89 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm23746-201ENSMUST00000104229 125 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm24649-201ENSMUST00000157106 134 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm25860-201ENSMUST00000158252 126 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC3.8□□□□□ -1.8
Col9a1Q05722 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col9a1Q05722 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col9a1Q05722 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Col9a1Q05722 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col9a1Q05722 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.8□□□□□ -1.8
Col9a1Q05722 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col9a1Q05722 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Col9a1Q05722 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col9a1Q05722 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col9a1Q05722 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm22149-201ENSMUST00000104442 136 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm14882-201ENSMUST00000117216 218 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm23381-201ENSMUST00000157676 94 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm23083-201ENSMUST00000157851 116 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm23261-201ENSMUST00000158316 136 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Mir3058-201ENSMUST00000175126 91 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Mir5619-201ENSMUST00000176065 61 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm42960-201ENSMUST00000202160 241 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm44703-201ENSMUST00000205724 248 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm19563-201ENSMUST00000222031 270 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm25205-201ENSMUST00000082841 103 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Gm26109-201ENSMUST00000083970 70 ntBASIC3.79□□□□□ -1.8
Col9a1Q05722 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Col9a1Q05722 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Col9a1Q05722 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Col9a1Q05722 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms