Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.33□□□□□ -1.88
Col6a1Q04857 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm42785-201ENSMUST00000202316 3835 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm26081-201ENSMUST00000104068 132 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm15365-201ENSMUST00000122392 300 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm24937-201ENSMUST00000122597 134 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Mir7009-201ENSMUST00000184519 64 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm18433-202ENSMUST00000195682 196 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm10025-201ENSMUST00000079568 372 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm24461-201ENSMUST00000082735 103 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Gm22509-201ENSMUST00000082775 107 ntBASIC3.32□□□□□ -1.88
Col6a1Q04857 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a1Q04857 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a1Q04857 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a1Q04857 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Col6a1Q04857 Gm26342-201ENSMUST00000104557 129 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 Gm27379-201ENSMUST00000183730 123 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC3.31□□□□□ -1.88
Col6a1Q04857 Gm37037-201ENSMUST00000194475 424 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 Gm25589-201ENSMUST00000082502 166 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 AF357341-201ENSMUST00000083088 75 ntBASIC3.31□□□□□ -1.88
Col6a1Q04857 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a1Q04857 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a1Q04857 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a1Q04857 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm15733-201ENSMUST00000132957 242 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm23080-201ENSMUST00000157846 103 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm22099-201ENSMUST00000157925 123 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm25380-201ENSMUST00000175463 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm24641-201ENSMUST00000178055 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm25484-201ENSMUST00000178217 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm26138-201ENSMUST00000179236 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm22821-201ENSMUST00000179288 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm23140-201ENSMUST00000082487 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm23298-201ENSMUST00000083181 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm24614-201ENSMUST00000083269 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm23264-201ENSMUST00000083372 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm22057-201ENSMUST00000083387 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm22576-201ENSMUST00000083733 104 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm25516-201ENSMUST00000083857 107 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.3□□□□□ -1.88
Col6a1Q04857 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a1Q04857 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.3□□□□□ -1.88
Col6a1Q04857 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a1Q04857 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a1Q04857 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a1Q04857 Gm25059-201ENSMUST00000157367 117 ntBASIC3.29□□□□□ -1.88
Col6a1Q04857 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Col6a1Q04857 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col6a1Q04857 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm14536-201ENSMUST00000118324 138 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm12213-201ENSMUST00000119924 353 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm15027-201ENSMUST00000120922 138 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm23434-201ENSMUST00000157179 100 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm24922-201ENSMUST00000158511 102 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm22666-201ENSMUST00000158717 164 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm23268-201ENSMUST00000175494 78 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm45288-201ENSMUST00000210236 151 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Gm11351-202ENSMUST00000225724 478 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Mir218-1-201ENSMUST00000083669 110 ntBASIC3.28□□□□□ -1.88
Col6a1Q04857 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Col6a1Q04857 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Col6a1Q04857 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Col6a1Q04857 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm15067-201ENSMUST00000119534 156 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm12086-201ENSMUST00000120863 228 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm23718-201ENSMUST00000157350 307 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm22212-201ENSMUST00000158096 106 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm29604-201ENSMUST00000187176 163 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm6060-201ENSMUST00000188671 251 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC3.27□□□□□ -1.89
Col6a1Q04857 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm26493-201ENSMUST00000083155 136 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Gm43753-201ENSMUST00000196539 3309 ntBASIC3.27□□□□□ -1.89
Col6a1Q04857 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Col6a1Q04857 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col6a1Q04857 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Col6a1Q04857 Mir693-201ENSMUST00000102187 89 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms