Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm24853-201ENSMUST00000158026 121 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm24668-201ENSMUST00000158935 104 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Snora24-201ENSMUST00000174989 130 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm24810-201ENSMUST00000175317 70 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm38050-201ENSMUST00000191904 238 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm42622-201ENSMUST00000197229 355 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm43367-201ENSMUST00000199986 625 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm44960-201ENSMUST00000207403 141 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm44654-201ENSMUST00000208052 329 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Nkx3-1P97436 Snord68-201ENSMUST00000082516 86 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Rny3-201ENSMUST00000083011 102 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm25683-201ENSMUST00000083940 131 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Nkx3-1P97436 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm11859-201ENSMUST00000118099 455 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm11862-201ENSMUST00000119678 659 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm23170-201ENSMUST00000157158 106 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm22929-201ENSMUST00000175517 107 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm23191-201ENSMUST00000179147 107 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm28912-201ENSMUST00000189001 234 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm43035-201ENSMUST00000197626 517 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.81□□□□□ -2.28
Nkx3-1P97436 Gm45704-201ENSMUST00000212582 403 ntBASIC0.81□□□□□ -2.28
Nkx3-1P97436 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.8□□□□□ -2.28
Nkx3-1P97436 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Mir701-201ENSMUST00000102208 109 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Mir374b-201ENSMUST00000102314 95 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm11248-201ENSMUST00000119568 201 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm11254-201ENSMUST00000122368 653 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm25423-201ENSMUST00000157609 107 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm24504-201ENSMUST00000157679 100 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm25044-201ENSMUST00000158603 104 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm24618-201ENSMUST00000177718 94 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm23953-201ENSMUST00000178214 94 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm26332-201ENSMUST00000179813 94 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm22863-201ENSMUST00000180265 94 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm25284-201ENSMUST00000180345 141 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm27410-201ENSMUST00000183851 115 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Mir7675-201ENSMUST00000184262 58 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm28995-201ENSMUST00000186625 261 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm42855-201ENSMUST00000197388 253 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm20144-201ENSMUST00000203031 165 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm23041-201ENSMUST00000083868 106 ntBASIC0.8□□□□□ -2.28
Nkx3-1P97436 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm13729-201ENSMUST00000120328 406 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm24498-201ENSMUST00000158445 102 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm25901-201ENSMUST00000158494 130 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm25491-201ENSMUST00000158733 308 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm16399-201ENSMUST00000181423 219 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm27317-201ENSMUST00000183533 95 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm28489-201ENSMUST00000186655 316 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm28992-201ENSMUST00000190534 139 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm28927-201ENSMUST00000191528 272 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm42533-201ENSMUST00000196247 157 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm44010-201ENSMUST00000204432 331 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm25930-201ENSMUST00000082785 107 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Nkx3-1P97436 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.79□□□□□ -2.28
Nkx3-1P97436 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm13967-201ENSMUST00000120404 380 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm13992-201ENSMUST00000120558 156 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm11792-201ENSMUST00000120640 168 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm15214-201ENSMUST00000122155 470 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm22281-201ENSMUST00000157198 103 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm22425-201ENSMUST00000158532 138 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm22435-201ENSMUST00000158552 128 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm17067-202ENSMUST00000180131 123 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.78□□□□□ -2.28
Nkx3-1P97436 Mir6346-201ENSMUST00000183982 81 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm20118-201ENSMUST00000187207 162 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 AC153526.1-201ENSMUST00000219750 190 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 Gm33654-201ENSMUST00000221704 215 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.78□□□□□ -2.28
Nkx3-1P97436 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms