Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Mir669a-4-201ENSMUST00000198665 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-9-201ENSMUST00000200087 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-8-201ENSMUST00000200268 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm43976-201ENSMUST00000203637 235 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm44687-201ENSMUST00000204975 235 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm44962-201ENSMUST00000206460 279 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm44960-201ENSMUST00000207403 141 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm45365-201ENSMUST00000209489 256 ntBASIC1.41□□□□□ -2.18
Sox3P53784 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.41□□□□□ -2.18
Sox3P53784 AC125311.1-201ENSMUST00000226950 220 ntBASIC1.41□□□□□ -2.18
Sox3P53784 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm22685-201ENSMUST00000082848 106 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir196b-201ENSMUST00000083509 85 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir32-201ENSMUST00000083610 70 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm22027-201ENSMUST00000122737 127 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm25805-201ENSMUST00000122788 108 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm22281-201ENSMUST00000157198 103 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm23122-201ENSMUST00000157645 103 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm26400-201ENSMUST00000175012 85 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm27410-201ENSMUST00000183851 115 ntBASIC1.4□□□□□ -2.19
Sox3P53784 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm24625-201ENSMUST00000082622 130 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Gm24356-201ENSMUST00000082859 106 ntBASIC1.4□□□□□ -2.19
Sox3P53784 Mir293-201ENSMUST00000104841 80 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm9059-201ENSMUST00000118319 183 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm26049-201ENSMUST00000157313 108 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm25730-201ENSMUST00000178753 165 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm26200-201ENSMUST00000180273 79 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm37918-201ENSMUST00000192071 120 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.39□□□□□ -2.19
Sox3P53784 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Sox3P53784 Gm45907-201ENSMUST00000213023 193 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm10264-201ENSMUST00000220589 429 ntBASIC1.39□□□□□ -2.19
Sox3P53784 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm5899-201ENSMUST00000071770 270 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Snora3-201ENSMUST00000083082 132 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Gm25789-201ENSMUST00000083294 76 ntBASIC1.39□□□□□ -2.19
Sox3P53784 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Sox3P53784 Gm14906-201ENSMUST00000119265 390 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Gm15861-201ENSMUST00000120979 339 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Gm23656-201ENSMUST00000122626 112 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Gm23718-201ENSMUST00000157350 307 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Gm22929-201ENSMUST00000175517 107 ntBASIC1.38□□□□□ -2.19
Sox3P53784 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Gm22364-201ENSMUST00000083097 98 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Mir221-201ENSMUST00000083488 95 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.38□□□□□ -2.19
Sox3P53784 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Sox3P53784 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Sox3P53784 Mir223-201ENSMUST00000102112 110 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm25992-201ENSMUST00000102437 109 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Sox3P53784 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Sox3P53784 Gm26150-201ENSMUST00000157426 151 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm22082-201ENSMUST00000157587 161 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm22080-201ENSMUST00000157591 106 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm24504-201ENSMUST00000157679 100 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm22963-201ENSMUST00000157960 91 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm22945-201ENSMUST00000158557 157 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm17113-201ENSMUST00000170118 171 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm23921-201ENSMUST00000175258 107 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm26968-201ENSMUST00000182894 481 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Mir7683-201ENSMUST00000183842 61 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Mir7241-201ENSMUST00000184532 64 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm29229-201ENSMUST00000188874 323 ntBASIC1.37□□□□□ -2.19
Sox3P53784 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Sox3P53784 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.37□□□□□ -2.19
Sox3P53784 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC1.37□□□□□ -2.19
Sox3P53784 Gm23100-201ENSMUST00000083455 141 ntBASIC1.37□□□□□ -2.19
Sox3P53784 Gm25318-201ENSMUST00000122554 314 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Gm23170-201ENSMUST00000157158 106 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Gm24229-201ENSMUST00000158830 118 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Gm23793-201ENSMUST00000179396 117 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Sox3P53784 Gm23370-201ENSMUST00000199545 130 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Gm20144-201ENSMUST00000203031 165 ntBASIC1.36□□□□□ -2.19
Sox3P53784 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Sox3P53784 Gm23404-201ENSMUST00000082543 97 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Gm24536-201ENSMUST00000083144 107 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Mir10b-201ENSMUST00000083566 68 ntBASIC1.36□□□□□ -2.19
Sox3P53784 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
Sox3P53784 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Sox3P53784 Gm22780-201ENSMUST00000104084 132 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.35□□□□□ -2.19
Sox3P53784 Gm24677-201ENSMUST00000158755 150 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm26159-201ENSMUST00000158968 104 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm23636-201ENSMUST00000175070 95 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm33866-201ENSMUST00000196911 289 ntBASIC1.35□□□□□ -2.19
Sox3P53784 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.35□□□□□ -2.19
Sox3P53784 AC109214.2-201ENSMUST00000220089 358 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm46997-201ENSMUST00000222108 217 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Sox3P53784 Gm24252-201ENSMUST00000083700 132 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm24163-201ENSMUST00000093660 132 ntBASIC1.35□□□□□ -2.19
Sox3P53784 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms