Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm22509-201ENSMUST00000082775 107 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm22972-201ENSMUST00000083297 131 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Mir410-201ENSMUST00000083563 81 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm24698-201ENSMUST00000083883 130 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Snora2b-201ENSMUST00000084005 137 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox1P53783 Gm15303-201ENSMUST00000118676 2624 ntBASIC3.22□□□□□ -1.89
Sox1P53783 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Sox1P53783 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.21□□□□□ -1.89
Sox1P53783 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Sox1P53783 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox1P53783 Gm26081-201ENSMUST00000104068 132 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm24907-201ENSMUST00000116932 128 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm15067-201ENSMUST00000119534 156 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm16186-201ENSMUST00000120132 216 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm23434-201ENSMUST00000157179 100 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm23592-201ENSMUST00000157859 117 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm22108-201ENSMUST00000177961 106 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Sox1P53783 Gm26435-201ENSMUST00000179026 107 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm24798-201ENSMUST00000179334 106 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm25528-201ENSMUST00000180264 132 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm21064-202ENSMUST00000190583 278 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm6801-201ENSMUST00000190697 339 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm43898-201ENSMUST00000204456 424 ntBASIC3.21□□□□□ -1.9
Sox1P53783 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.21□□□□□ -1.9
Sox1P53783 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Gm25797-201ENSMUST00000082640 107 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Snord61-201ENSMUST00000083176 71 ntBASIC3.21□□□□□ -1.9
Sox1P53783 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Sox1P53783 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Sox1P53783 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.21□□□□□ -1.9
Sox1P53783 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Sox1P53783 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Sox1P53783 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox1P53783 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Sox1P53783 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox1P53783 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Mir669d-201ENSMUST00000104644 121 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm22213-201ENSMUST00000157564 119 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm27934-201ENSMUST00000158795 63 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm25933-201ENSMUST00000178943 108 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm27379-201ENSMUST00000183730 123 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm44343-201ENSMUST00000196702 90 ntBASIC3.2□□□□□ -1.9
Sox1P53783 AC149294.9-201ENSMUST00000227256 164 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm25581-201ENSMUST00000083410 164 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Gm22576-201ENSMUST00000083733 104 ntBASIC3.2□□□□□ -1.9
Sox1P53783 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Sox1P53783 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox1P53783 AC154515.1-201ENSMUST00000226085 2841 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Gm23324-201ENSMUST00000157421 131 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Gm23671-201ENSMUST00000157472 103 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Gm24811-201ENSMUST00000175313 100 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.19□□□□□ -1.9
Sox1P53783 Gm28912-201ENSMUST00000189001 234 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Gm28155-201ENSMUST00000191066 151 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Gm37290-201ENSMUST00000195775 339 ntBASIC3.19□□□□□ -1.9
Sox1P53783 mt-Ta-201ENSMUST00000082398 69 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Gm24030-201ENSMUST00000083931 164 ntBASIC3.19□□□□□ -1.9
Sox1P53783 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Sox1P53783 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox1P53783 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox1P53783 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sox1P53783 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sox1P53783 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sox1P53783 Gm22935-201ENSMUST00000103960 104 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Gm24930-201ENSMUST00000158315 83 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Gm28900-201ENSMUST00000185232 156 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC3.18□□□□□ -1.9
Sox1P53783 Mir7657-201ENSMUST00000196051 57 ntBASIC3.18□□□□□ -1.9
Sox1P53783 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.18□□□□□ -1.9
Sox1P53783 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Snora31-201ENSMUST00000083213 130 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Gm23264-201ENSMUST00000083372 107 ntBASIC3.18□□□□□ -1.9
Sox1P53783 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sox1P53783 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sox1P53783 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sox1P53783 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sox1P53783 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sox1P53783 Gm23911-201ENSMUST00000104596 134 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Sox1P53783 Mir5127-201ENSMUST00000175295 71 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Gm23268-201ENSMUST00000175494 78 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Gm44326-201ENSMUST00000198226 101 ntBASIC3.17□□□□□ -1.9
Sox1P53783 CT033785.1-201ENSMUST00000224872 272 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Mir340-201ENSMUST00000083483 98 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Sox1P53783 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.17□□□□□ -1.9
Sox1P53783 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.17□□□□□ -1.9
Sox1P53783 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sox1P53783 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sox1P53783 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sox1P53783 Gm26011-201ENSMUST00000104410 104 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm11356-201ENSMUST00000118974 192 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm25060-201ENSMUST00000157374 130 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm28169-201ENSMUST00000190342 345 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Gm44476-201ENSMUST00000196225 91 ntBASIC3.16□□□□□ -1.9
Sox1P53783 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms