Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Sox18P43680 Gm24068-201ENSMUST00000104513 132 ntBASIC3.55□□□□□ -1.84
Sox18P43680 Gm25539-201ENSMUST00000116886 122 ntBASIC3.55□□□□□ -1.84
Sox18P43680 Gm25112-201ENSMUST00000122680 104 ntBASIC3.55□□□□□ -1.84
Sox18P43680 Gm25456-201ENSMUST00000157952 109 ntBASIC3.55□□□□□ -1.84
Sox18P43680 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.55□□□□□ -1.84
Sox18P43680 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.55□□□□□ -1.84
Sox18P43680 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Sox18P43680 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.55□□□□□ -1.84
Sox18P43680 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Sox18P43680 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Sox18P43680 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.54□□□□□ -1.84
Sox18P43680 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Sox18P43680 Gm23530-201ENSMUST00000104564 137 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Gm13885-201ENSMUST00000117569 187 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Gm26415-201ENSMUST00000157673 292 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Mir3092-201ENSMUST00000174954 96 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Gm45456-201ENSMUST00000210841 243 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.54□□□□□ -1.84
Sox18P43680 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
Sox18P43680 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.54□□□□□ -1.84
Sox18P43680 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Sox18P43680 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sox18P43680 Gm24096-201ENSMUST00000103905 110 ntBASIC3.53□□□□□ -1.84
Sox18P43680 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm26273-201ENSMUST00000104180 131 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm24280-201ENSMUST00000104237 134 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm24598-201ENSMUST00000122510 74 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm15281-201ENSMUST00000125181 351 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm27592-201ENSMUST00000157729 126 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm23858-201ENSMUST00000158384 106 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Mir1927-201ENSMUST00000158579 109 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm24510-201ENSMUST00000174965 94 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm22174-201ENSMUST00000175050 125 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm22692-201ENSMUST00000175055 125 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm27634-201ENSMUST00000175060 126 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm26460-201ENSMUST00000175061 126 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm22460-201ENSMUST00000175269 124 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm24365-201ENSMUST00000175384 125 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm44310-201ENSMUST00000175424 126 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm22639-201ENSMUST00000175591 125 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm24979-201ENSMUST00000178626 126 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm27743-201ENSMUST00000185136 126 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm44464-201ENSMUST00000198010 138 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Gm24615-201ENSMUST00000083268 113 ntBASIC3.53□□□□□ -1.84
Sox18P43680 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Sox18P43680 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Sox18P43680 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Sox18P43680 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
Sox18P43680 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sox18P43680 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sox18P43680 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Sox18P43680 Gm24118-201ENSMUST00000103972 126 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Gm24171-201ENSMUST00000104126 131 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Gm25308-201ENSMUST00000104171 158 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.52□□□□□ -1.85
Sox18P43680 Gm22770-201ENSMUST00000158368 67 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Gm27903-201ENSMUST00000175482 126 ntBASIC3.52□□□□□ -1.85
Sox18P43680 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Sox18P43680 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sox18P43680 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sox18P43680 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Sox18P43680 Gm22270-201ENSMUST00000104034 132 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.51□□□□□ -1.85
Sox18P43680 Gm24911-201ENSMUST00000157292 136 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Gm24244-201ENSMUST00000157317 130 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Gm28924-201ENSMUST00000190012 241 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Gm43706-201ENSMUST00000198767 2652 ntBASIC3.51□□□□□ -1.85
Sox18P43680 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Sox18P43680 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm45652-201ENSMUST00000210926 3831 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Sox18P43680 Mir374b-201ENSMUST00000102314 95 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm12213-201ENSMUST00000119924 353 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm22956-201ENSMUST00000122520 80 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm26476-201ENSMUST00000122618 313 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm23381-201ENSMUST00000157676 94 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm20399-201ENSMUST00000174652 132 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm44482-201ENSMUST00000199232 103 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm45317-201ENSMUST00000210385 223 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Gm24626-201ENSMUST00000082621 161 ntBASIC3.5□□□□□ -1.85
Sox18P43680 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.5□□□□□ -1.85
Sox18P43680 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Sox18P43680 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Sox18P43680 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Sox18P43680 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.5□□□□□ -1.85
Sox18P43680 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.49□□□□□ -1.85
Sox18P43680 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sox18P43680 Gm44578-201ENSMUST00000207236 3835 ntBASIC3.49□□□□□ -1.85
Sox18P43680 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Sox18P43680 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Sox18P43680 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Sox18P43680 Gm22750-201ENSMUST00000102076 103 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms