Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Mir3096-201ENSMUST00000116685 71 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm14774-201ENSMUST00000117857 536 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm15497-201ENSMUST00000119137 551 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm11862-201ENSMUST00000119678 659 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Col2a1P28481 Gm26029-201ENSMUST00000158659 132 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm25956-201ENSMUST00000175115 217 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm27997-201ENSMUST00000184942 69 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm28257-201ENSMUST00000185244 463 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm29665-201ENSMUST00000191457 528 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Mir6375-201ENSMUST00000197176 95 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Mir3068-202ENSMUST00000197755 79 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm44473-201ENSMUST00000204039 152 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Col2a1P28481 AC151833.1-201ENSMUST00000227752 574 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm23679-201ENSMUST00000083161 119 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Mir211-201ENSMUST00000083651 106 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm23845-201ENSMUST00000083834 152 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Gm23041-201ENSMUST00000083868 106 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Col2a1P28481 Mdga2-203ENSMUST00000113942 423 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm22598-201ENSMUST00000157600 127 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm22382-201ENSMUST00000158185 130 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm23581-201ENSMUST00000158531 63 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm24348-201ENSMUST00000158710 130 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm24677-201ENSMUST00000158755 150 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm25161-201ENSMUST00000158913 132 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Mir7663-201ENSMUST00000183950 61 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm38060-201ENSMUST00000194822 464 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm44962-201ENSMUST00000206460 279 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 AC164161.1-201ENSMUST00000214076 639 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm18188-201ENSMUST00000219386 478 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.48□□□□□ -2.17
Col2a1P28481 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col2a1P28481 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Col2a1P28481 Gm25141-201ENSMUST00000083177 107 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm25409-201ENSMUST00000083764 131 ntBASIC1.48□□□□□ -2.17
Col2a1P28481 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Col2a1P28481 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col2a1P28481 Mir669g-201ENSMUST00000116809 123 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Mir1b-201ENSMUST00000117012 122 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm11572-201ENSMUST00000119164 120 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm12309-201ENSMUST00000119889 182 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm23921-201ENSMUST00000175258 107 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm24308-201ENSMUST00000177773 114 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm22951-201ENSMUST00000179471 107 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm25457-201ENSMUST00000179509 107 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col2a1P28481 Gm28288-201ENSMUST00000191019 214 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Col2a1P28481 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Gm25896-201ENSMUST00000083713 136 ntBASIC1.47□□□□□ -2.17
Col2a1P28481 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Col2a1P28481 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Col2a1P28481 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.17
Col2a1P28481 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Col2a1P28481 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Mir875-201ENSMUST00000104698 78 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Mir872-201ENSMUST00000104728 81 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm6829-201ENSMUST00000119858 360 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm14782-201ENSMUST00000120151 195 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm13967-201ENSMUST00000120404 380 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm15213-201ENSMUST00000122098 216 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm24895-201ENSMUST00000122742 74 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm24892-201ENSMUST00000122747 104 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.46□□□□□ -2.18
Col2a1P28481 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.46□□□□□ -2.18
Col2a1P28481 Gm22603-201ENSMUST00000157603 96 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm25121-201ENSMUST00000179846 79 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm27761-201ENSMUST00000184091 131 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm37713-201ENSMUST00000191746 198 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm43250-201ENSMUST00000196536 273 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm45313-201ENSMUST00000210584 178 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm2829-201ENSMUST00000213121 499 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm25078-201ENSMUST00000082530 107 ntBASIC1.46□□□□□ -2.18
Col2a1P28481 Gm26186-201ENSMUST00000157689 125 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 Gm27747-201ENSMUST00000184707 85 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 Gm36891-201ENSMUST00000191995 655 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 Gm44989-201ENSMUST00000204749 217 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 Gm7065-201ENSMUST00000222150 474 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 Gm23625-201ENSMUST00000082457 100 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.45□□□□□ -2.18
Col2a1P28481 Gm11854-201ENSMUST00000117839 446 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Gm14919-201ENSMUST00000120839 390 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Col2a1P28481 Gm25625-201ENSMUST00000157221 96 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Gm22315-201ENSMUST00000158010 143 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Gm22447-201ENSMUST00000158155 92 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Gm29140-201ENSMUST00000190187 476 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.44□□□□□ -2.18
Col2a1P28481 Gm24165-201ENSMUST00000082718 128 ntBASIC1.44□□□□□ -2.18
Col2a1P28481 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Col2a1P28481 Gm22195-201ENSMUST00000116861 108 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms