Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23106-201ENSMUST00000157554 101 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm22551-201ENSMUST00000157795 103 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm25868-201ENSMUST00000158253 114 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm23022-201ENSMUST00000158768 180 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.91□□□□□ -2.26
Sdc1P18828 Gm44408-201ENSMUST00000200205 66 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm8125-201ENSMUST00000216602 738 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Sdc1P18828 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Sdc1P18828 Mir301b-201ENSMUST00000102333 97 ntBASIC0.9□□□□□ -2.27
Sdc1P18828 Gm23670-201ENSMUST00000157469 119 ntBASIC0.9□□□□□ -2.27
Sdc1P18828 Gm27410-201ENSMUST00000183851 115 ntBASIC0.9□□□□□ -2.27
Sdc1P18828 AC166358.7-201ENSMUST00000221132 108 ntBASIC0.9□□□□□ -2.27
Sdc1P18828 AC125543.5-201ENSMUST00000222799 108 ntBASIC0.9□□□□□ -2.27
Sdc1P18828 Gm23614-201ENSMUST00000082598 107 ntBASIC0.9□□□□□ -2.27
Sdc1P18828 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Sdc1P18828 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.89□□□□□ -2.27
Sdc1P18828 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.89□□□□□ -2.27
Sdc1P18828 Gm27419-201ENSMUST00000184576 109 ntBASIC0.89□□□□□ -2.27
Sdc1P18828 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.89□□□□□ -2.27
Sdc1P18828 Gm24163-201ENSMUST00000093660 132 ntBASIC0.89□□□□□ -2.27
Sdc1P18828 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Sdc1P18828 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Sdc1P18828 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Sdc1P18828 Gm26049-201ENSMUST00000157313 108 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Gm22555-201ENSMUST00000157801 62 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Gm24221-201ENSMUST00000158833 313 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Gm28661-201ENSMUST00000188231 681 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC0.88□□□□□ -2.27
Sdc1P18828 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 AC154636.2-201ENSMUST00000222538 161 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.88□□□□□ -2.27
Sdc1P18828 AC160115.1-201ENSMUST00000224678 1574 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Sdc1P18828 Gm22545-201ENSMUST00000104350 132 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Gm3788-201ENSMUST00000119949 136 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Gm11792-201ENSMUST00000120640 168 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Sdc1P18828 Gm25069-201ENSMUST00000175238 86 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Mir8119-201ENSMUST00000183371 129 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Mir7225-201ENSMUST00000184178 54 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Mir7050-201ENSMUST00000184636 60 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Gm28344-201ENSMUST00000185704 279 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Sdc1P18828 Gm23299-201ENSMUST00000082708 79 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Gm25683-201ENSMUST00000083940 131 ntBASIC0.87□□□□□ -2.27
Sdc1P18828 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Sdc1P18828 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Sdc1P18828 Mir465b-1-201ENSMUST00000103940 79 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Mir465b-2-201ENSMUST00000104662 79 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Gm22556-201ENSMUST00000157803 100 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Mir6381-201ENSMUST00000183426 87 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Gm27420-201ENSMUST00000183823 79 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Gm20118-201ENSMUST00000187207 162 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Gm43427-201ENSMUST00000198188 331 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.86□□□□□ -2.27
Sdc1P18828 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
Sdc1P18828 Gm23705-201ENSMUST00000104370 130 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm11798-201ENSMUST00000119150 421 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm12748-201ENSMUST00000120763 504 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm11334-201ENSMUST00000121969 156 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm25284-201ENSMUST00000180345 141 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Mir6380-201ENSMUST00000184334 81 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm27640-201ENSMUST00000184580 147 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm37337-201ENSMUST00000192601 993 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm44325-201ENSMUST00000196757 77 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm44465-201ENSMUST00000199536 114 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm44811-201ENSMUST00000209120 228 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm5023-201ENSMUST00000217442 587 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm9795-201ENSMUST00000062156 693 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Mir32-201ENSMUST00000083610 70 ntBASIC0.85□□□□□ -2.27
Sdc1P18828 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Sdc1P18828 Gm24431-201ENSMUST00000104073 66 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm24902-201ENSMUST00000158126 123 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm24076-201ENSMUST00000158179 94 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm22425-201ENSMUST00000158532 138 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm26004-201ENSMUST00000158804 116 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm25831-201ENSMUST00000158924 163 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm24638-201ENSMUST00000179807 132 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm28408-201ENSMUST00000191557 463 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.84□□□□□ -2.27
Sdc1P18828 Gm37801-201ENSMUST00000194754 274 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.84□□□□□ -2.27
Sdc1P18828 Gm23142-201ENSMUST00000101848 105 ntBASIC0.83□□□□□ -2.28
Sdc1P18828 Gm26240-201ENSMUST00000101893 105 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms