Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm22403-201ENSMUST00000174919 84 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Gm28344-201ENSMUST00000185704 279 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Gm5001-201ENSMUST00000204361 331 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 AC151833.1-201ENSMUST00000227752 574 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
Cdx1P18111 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Cdx1P18111 Gm42755-201ENSMUST00000198533 1493 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm12255-201ENSMUST00000117184 284 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm11891-201ENSMUST00000121241 619 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm27545-201ENSMUST00000184755 202 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm28343-201ENSMUST00000185386 112 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.87□□□□□ -2.27
Cdx1P18111 Gm9227-201ENSMUST00000194733 566 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 Gm44301-201ENSMUST00000200362 143 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 AC147101.1-201ENSMUST00000217964 312 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 AC166358.10-201ENSMUST00000220556 144 ntBASIC0.87□□□□□ -2.27
Cdx1P18111 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
Cdx1P18111 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Cdx1P18111 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.86□□□□□ -2.27
Cdx1P18111 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.86□□□□□ -2.27
Cdx1P18111 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.86□□□□□ -2.27
Cdx1P18111 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.86□□□□□ -2.27
Cdx1P18111 Gm12225-201ENSMUST00000117995 298 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm12748-201ENSMUST00000120763 504 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm11254-201ENSMUST00000122368 653 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.86□□□□□ -2.27
Cdx1P18111 Gm23106-201ENSMUST00000157554 101 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm25011-201ENSMUST00000158398 126 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm24005-201ENSMUST00000158459 296 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm3027-201ENSMUST00000167579 451 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm28257-201ENSMUST00000185244 463 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm28506-201ENSMUST00000189937 150 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm28414-201ENSMUST00000190111 294 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 AC129208.2-201ENSMUST00000228506 320 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm23731-201ENSMUST00000083749 107 ntBASIC0.86□□□□□ -2.27
Cdx1P18111 Gm13967-201ENSMUST00000120404 380 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm14287-201ENSMUST00000121060 117 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.85□□□□□ -2.27
Cdx1P18111 Gm23016-201ENSMUST00000158431 62 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm26430-201ENSMUST00000178054 107 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm26335-201ENSMUST00000178449 107 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm27793-201ENSMUST00000183405 76 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm42719-201ENSMUST00000197393 355 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 AC163033.1-201ENSMUST00000218608 157 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.85□□□□□ -2.27
Cdx1P18111 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Cdx1P18111 Gm23097-201ENSMUST00000083448 105 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm25207-201ENSMUST00000093745 107 ntBASIC0.85□□□□□ -2.27
Cdx1P18111 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm23705-201ENSMUST00000104370 130 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm14392-201ENSMUST00000120332 401 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm14413-201ENSMUST00000122158 408 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm24942-201ENSMUST00000158328 114 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm22136-201ENSMUST00000158751 268 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm24085-201ENSMUST00000175172 116 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm26200-201ENSMUST00000180273 79 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm27419-201ENSMUST00000184576 109 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm37918-201ENSMUST00000192071 120 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Cdx1P18111 Gm36953-201ENSMUST00000195295 268 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm44726-201ENSMUST00000203427 217 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm9795-201ENSMUST00000062156 693 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Gm23055-201ENSMUST00000082805 94 ntBASIC0.84□□□□□ -2.27
Cdx1P18111 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.84□□□□□ -2.27
Cdx1P18111 Gm22544-201ENSMUST00000104349 127 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm26474-201ENSMUST00000116762 122 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm11386-201ENSMUST00000117761 347 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm25715-201ENSMUST00000158627 125 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm25486-201ENSMUST00000158726 63 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm25314-201ENSMUST00000178810 79 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Cdx1P18111 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Cdx1P18111 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Cdx1P18111 Mir6380-201ENSMUST00000184334 81 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm37713-201ENSMUST00000191746 198 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm23140-201ENSMUST00000082487 107 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.83□□□□□ -2.28
Cdx1P18111 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Cdx1P18111 Gm22656-201ENSMUST00000104199 171 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Gm14269-201ENSMUST00000120455 306 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Gm15899-201ENSMUST00000128586 238 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Mir7663-201ENSMUST00000183950 61 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Gm27539-201ENSMUST00000184971 224 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Gm45403-201ENSMUST00000209453 276 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 Gm45402-201ENSMUST00000211796 223 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 AC167192.2-201ENSMUST00000224794 198 ntBASIC0.82□□□□□ -2.28
Cdx1P18111 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms