Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm45374-201ENSMUST00000211388 136 ntBASIC0.09□□□□□ -2.4
Col1a1P11087 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.09□□□□□ -2.4
Col1a1P11087 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.09□□□□□ -2.4
Col1a1P11087 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.09□□□□□ -2.4
Col1a1P11087 Gm5899-201ENSMUST00000071770 270 ntBASIC0.09□□□□□ -2.4
Col1a1P11087 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
Col1a1P11087 Mir487b-201ENSMUST00000102265 82 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm9059-201ENSMUST00000118319 183 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm14269-201ENSMUST00000120455 306 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm14846-201ENSMUST00000121868 216 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm23958-201ENSMUST00000157207 105 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm19901-201ENSMUST00000192191 495 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm44870-201ENSMUST00000207291 357 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Gm24045-201ENSMUST00000083113 98 ntBASIC0.08□□□□□ -2.4
Col1a1P11087 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Gm24833-201ENSMUST00000116775 120 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Gm25847-201ENSMUST00000116793 96 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Gm23335-201ENSMUST00000117021 90 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Gm11334-201ENSMUST00000121969 156 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Gm24439-201ENSMUST00000157894 117 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Gm23862-201ENSMUST00000180342 94 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 AC164304.1-201ENSMUST00000226920 272 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col1a1P11087 Mir382-201ENSMUST00000083494 76 ntBASIC0.07□□□□□ -2.4
Col1a1P11087 Mir670-201ENSMUST00000102380 100 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm15061-201ENSMUST00000121076 1046 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm14491-201ENSMUST00000121919 199 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm25557-201ENSMUST00000158084 315 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm24510-201ENSMUST00000174965 94 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm43556-201ENSMUST00000196186 681 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 AC167669.4-201ENSMUST00000225967 140 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 AC122769.2-201ENSMUST00000227248 302 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Col1a1P11087 Gm24038-201ENSMUST00000082872 159 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm23516-201ENSMUST00000093728 107 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.06□□□□□ -2.4
Col1a1P11087 AC102369.2-201ENSMUST00000219725 1679 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm23422-201ENSMUST00000102000 107 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm24430-201ENSMUST00000104077 104 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm25309-201ENSMUST00000116728 126 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Col1a1P11087 Gm23535-201ENSMUST00000157542 106 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Col1a1P11087 Gm37757-201ENSMUST00000193072 210 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm45232-201ENSMUST00000207811 162 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC0.05□□□□□ -2.4
Col1a1P11087 Gm6607-201ENSMUST00000215035 328 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 AC167229.1-201ENSMUST00000220057 469 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 CT954323.1-201ENSMUST00000222774 229 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Mir214-201ENSMUST00000083582 110 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm23851-201ENSMUST00000083831 103 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 AC162910.1-201ENSMUST00000221219 1723 ntBASIC0.05□□□□□ -2.4
Col1a1P11087 Gm22545-201ENSMUST00000104350 132 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm14765-201ENSMUST00000121954 326 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm24084-201ENSMUST00000175173 137 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm25750-201ENSMUST00000175483 112 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm28921-201ENSMUST00000190219 378 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm38208-201ENSMUST00000192476 114 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm36984-201ENSMUST00000192770 235 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Mir703-201ENSMUST00000197105 109 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm45541-201ENSMUST00000210443 54 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 Gm24861-201ENSMUST00000083459 107 ntBASIC0.04□□□□□ -2.4
Col1a1P11087 n-R5s202-201ENSMUST00000104517 114 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Gm7916-201ENSMUST00000120325 456 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC0.03□□□□□ -2.4
Col1a1P11087 Gm20689-201ENSMUST00000176033 279 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Trdv3-201ENSMUST00000198551 309 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC0.03□□□□□ -2.4
Col1a1P11087 Gm30155-201ENSMUST00000223458 339 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Gm22704-201ENSMUST00000083027 137 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Gm25651-201ENSMUST00000083782 119 ntBASIC0.03□□□□□ -2.4
Col1a1P11087 Gm25563-201ENSMUST00000104603 74 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm14946-201ENSMUST00000119859 296 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm11904-201ENSMUST00000120562 248 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm14922-201ENSMUST00000121131 163 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm25884-201ENSMUST00000157782 62 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm25643-201ENSMUST00000158874 103 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.03□□□□□ -2.41
Col1a1P11087 Gm22234-201ENSMUST00000174906 65 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm25952-201ENSMUST00000175329 74 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm22584-201ENSMUST00000177935 92 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm24218-201ENSMUST00000180163 105 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm27313-201ENSMUST00000183500 142 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm31520-201ENSMUST00000203048 733 ntBASIC0.03□□□□□ -2.41
Col1a1P11087 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC0.03□□□□□ -2.41
Col1a1P11087 Gm25991-201ENSMUST00000102439 99 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Gm25968-201ENSMUST00000157167 100 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Gm22607-201ENSMUST00000158291 105 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Mir3108-201ENSMUST00000175500 79 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 Gm44137-201ENSMUST00000203670 367 ntBASIC0.02□□□□□ -2.41
Col1a1P11087 AC124569.4-201ENSMUST00000223830 1220 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms