Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm28369-201ENSMUST00000188993 315 ntBASIC1.45□□□□□ -2.18
P06344 Gm29037-201ENSMUST00000189092 313 ntBASIC1.45□□□□□ -2.18
P06344 Gm28909-201ENSMUST00000189406 315 ntBASIC1.45□□□□□ -2.18
P06344 Gm28861-201ENSMUST00000189681 315 ntBASIC1.45□□□□□ -2.18
P06344 Gm29180-201ENSMUST00000190003 315 ntBASIC1.45□□□□□ -2.18
P06344 Gm29575-201ENSMUST00000190597 315 ntBASIC1.45□□□□□ -2.18
P06344 Gm29469-201ENSMUST00000191448 315 ntBASIC1.45□□□□□ -2.18
P06344 Gm18433-201ENSMUST00000192747 197 ntBASIC1.45□□□□□ -2.18
P06344 Gm45673-201ENSMUST00000210293 358 ntBASIC1.45□□□□□ -2.18
P06344 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.45□□□□□ -2.18
P06344 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.45□□□□□ -2.18
P06344 Gm11351-202ENSMUST00000225724 478 ntBASIC1.45□□□□□ -2.18
P06344 Gm24805-201ENSMUST00000082931 104 ntBASIC1.45□□□□□ -2.18
P06344 Gm26493-201ENSMUST00000083155 136 ntBASIC1.45□□□□□ -2.18
P06344 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
P06344 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
P06344 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.44□□□□□ -2.18
P06344 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
P06344 Gm24116-201ENSMUST00000103975 107 ntBASIC1.44□□□□□ -2.18
P06344 Gm25938-201ENSMUST00000104139 166 ntBASIC1.44□□□□□ -2.18
P06344 Gm23987-201ENSMUST00000117039 129 ntBASIC1.44□□□□□ -2.18
P06344 Gm15162-201ENSMUST00000119325 283 ntBASIC1.44□□□□□ -2.18
P06344 Gm22537-201ENSMUST00000158172 199 ntBASIC1.44□□□□□ -2.18
P06344 Gm23759-201ENSMUST00000158351 268 ntBASIC1.44□□□□□ -2.18
P06344 Gm28992-201ENSMUST00000190534 139 ntBASIC1.44□□□□□ -2.18
P06344 Gm44491-201ENSMUST00000196794 96 ntBASIC1.44□□□□□ -2.18
P06344 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
P06344 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.44□□□□□ -2.18
P06344 Gm24536-201ENSMUST00000083144 107 ntBASIC1.44□□□□□ -2.18
P06344 Gm10360-201ENSMUST00000097219 272 ntBASIC1.44□□□□□ -2.18
P06344 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
P06344 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
P06344 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.43□□□□□ -2.18
P06344 Gm14674-201ENSMUST00000117816 342 ntBASIC1.43□□□□□ -2.18
P06344 Gm15067-201ENSMUST00000119534 156 ntBASIC1.43□□□□□ -2.18
P06344 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.43□□□□□ -2.18
P06344 Gm27898-201ENSMUST00000183987 80 ntBASIC1.43□□□□□ -2.18
P06344 Gm28579-201ENSMUST00000186143 369 ntBASIC1.43□□□□□ -2.18
P06344 Mir376a-201ENSMUST00000197584 68 ntBASIC1.43□□□□□ -2.18
P06344 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.43□□□□□ -2.18
P06344 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.43□□□□□ -2.18
P06344 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.43□□□□□ -2.18
P06344 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
P06344 Gm24316-201ENSMUST00000083041 107 ntBASIC1.43□□□□□ -2.18
P06344 Mir669o-201ENSMUST00000103898 96 ntBASIC1.42□□□□□ -2.18
P06344 Gm22935-201ENSMUST00000103960 104 ntBASIC1.42□□□□□ -2.18
P06344 Gm15861-201ENSMUST00000120979 339 ntBASIC1.42□□□□□ -2.18
P06344 Gm14761-201ENSMUST00000121363 262 ntBASIC1.42□□□□□ -2.18
P06344 Gm24501-201ENSMUST00000158452 62 ntBASIC1.42□□□□□ -2.18
P06344 Gm24510-201ENSMUST00000174965 94 ntBASIC1.42□□□□□ -2.18
P06344 Gm21885-201ENSMUST00000178891 327 ntBASIC1.42□□□□□ -2.18
P06344 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.42□□□□□ -2.18
P06344 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.42□□□□□ -2.18
P06344 Gm45543-201ENSMUST00000209327 88 ntBASIC1.42□□□□□ -2.18
P06344 Gm45754-201ENSMUST00000212380 279 ntBASIC1.42□□□□□ -2.18
P06344 Gm45907-201ENSMUST00000213023 193 ntBASIC1.42□□□□□ -2.18
P06344 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC1.42□□□□□ -2.18
P06344 Gm25793-201ENSMUST00000083287 107 ntBASIC1.42□□□□□ -2.18
P06344 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.42□□□□□ -2.18
P06344 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.41□□□□□ -2.18
P06344 Mir301b-201ENSMUST00000102333 97 ntBASIC1.41□□□□□ -2.18
P06344 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
P06344 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
P06344 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
P06344 Gm12924-201ENSMUST00000121747 318 ntBASIC1.41□□□□□ -2.18
P06344 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
P06344 Gm25914-201ENSMUST00000157618 153 ntBASIC1.41□□□□□ -2.18
P06344 Gm24174-201ENSMUST00000158933 111 ntBASIC1.41□□□□□ -2.18
P06344 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
P06344 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.41□□□□□ -2.18
P06344 Gm7958-201ENSMUST00000178255 468 ntBASIC1.41□□□□□ -2.18
P06344 Gm7950-201ENSMUST00000179633 468 ntBASIC1.41□□□□□ -2.18
P06344 Mir7009-201ENSMUST00000184519 64 ntBASIC1.41□□□□□ -2.18
P06344 Gm28016-201ENSMUST00000184594 196 ntBASIC1.41□□□□□ -2.18
P06344 Gm27997-201ENSMUST00000184942 69 ntBASIC1.41□□□□□ -2.18
P06344 Gm28912-201ENSMUST00000189001 234 ntBASIC1.41□□□□□ -2.18
P06344 Gm29665-201ENSMUST00000191457 528 ntBASIC1.41□□□□□ -2.18
P06344 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.41□□□□□ -2.18
P06344 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.41□□□□□ -2.18
P06344 Gm24151-201ENSMUST00000082758 141 ntBASIC1.41□□□□□ -2.18
P06344 Gm24406-201ENSMUST00000083026 128 ntBASIC1.41□□□□□ -2.18
P06344 Snora3-201ENSMUST00000083082 132 ntBASIC1.41□□□□□ -2.18
P06344 Gm23845-201ENSMUST00000083834 152 ntBASIC1.41□□□□□ -2.18
P06344 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
P06344 Gm25832-201ENSMUST00000104140 130 ntBASIC1.4□□□□□ -2.19
P06344 Gm14882-201ENSMUST00000117216 218 ntBASIC1.4□□□□□ -2.19
P06344 Gm22027-201ENSMUST00000122737 127 ntBASIC1.4□□□□□ -2.19
P06344 Gm23390-201ENSMUST00000157393 106 ntBASIC1.4□□□□□ -2.19
P06344 U6.1-201ENSMUST00000157443 101 ntBASIC1.4□□□□□ -2.19
P06344 Gm25333-201ENSMUST00000158035 246 ntBASIC1.4□□□□□ -2.19
P06344 Gm24076-201ENSMUST00000158179 94 ntBASIC1.4□□□□□ -2.19
P06344 Gm22242-201ENSMUST00000175224 118 ntBASIC1.4□□□□□ -2.19
P06344 Gm7258-201ENSMUST00000179317 300 ntBASIC1.4□□□□□ -2.19
P06344 Gm27265-201ENSMUST00000183559 77 ntBASIC1.4□□□□□ -2.19
P06344 Mir7683-201ENSMUST00000183842 61 ntBASIC1.4□□□□□ -2.19
P06344 Mir6419-201ENSMUST00000184784 113 ntBASIC1.4□□□□□ -2.19
P06344 Mir3535-201ENSMUST00000197651 147 ntBASIC1.4□□□□□ -2.19
P06344 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.4□□□□□ -2.19
P06344 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.4□□□□□ -2.19
P06344 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 154.4 ms