Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm23599-201ENSMUST00000157261 251 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm23381-201ENSMUST00000157676 94 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm25933-201ENSMUST00000178943 108 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm29553-201ENSMUST00000189692 279 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm34139-201ENSMUST00000196166 294 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.75□□□□□ -1.97
Pcdha4O88689 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm44182-201ENSMUST00000204052 115 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm44922-201ENSMUST00000206690 90 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Pcdha4O88689 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.75□□□□□ -1.97
Pcdha4O88689 Gm26341-201ENSMUST00000104561 134 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Mir878-201ENSMUST00000104680 78 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm13885-201ENSMUST00000117569 187 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm14602-201ENSMUST00000118625 340 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm26105-201ENSMUST00000157253 190 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm25888-201ENSMUST00000157778 302 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm24436-201ENSMUST00000157889 302 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm6788-201ENSMUST00000166459 270 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm17161-201ENSMUST00000169187 524 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm16404-201ENSMUST00000177739 468 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm14598-201ENSMUST00000180109 468 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm14625-201ENSMUST00000180231 468 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm3852-201ENSMUST00000182781 264 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm28647-201ENSMUST00000188416 197 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm25204-201ENSMUST00000082843 106 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm26126-201ENSMUST00000083188 164 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.74□□□□□ -1.97
Pcdha4O88689 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Pcdha4O88689 Mir1195-201ENSMUST00000116818 98 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm24896-201ENSMUST00000122741 135 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm23223-201ENSMUST00000158119 127 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm25920-201ENSMUST00000158307 99 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Snord11-201ENSMUST00000158468 84 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm26097-201ENSMUST00000179642 93 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm43199-201ENSMUST00000200019 307 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm8031-201ENSMUST00000213430 626 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 CT030687.1-201ENSMUST00000221854 162 ntBASIC2.73□□□□□ -1.97
Pcdha4O88689 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Pcdha4O88689 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
Pcdha4O88689 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Pcdha4O88689 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm22752-201ENSMUST00000102083 109 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm24068-201ENSMUST00000104513 132 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm22051-201ENSMUST00000117002 127 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm15861-201ENSMUST00000120979 339 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm25866-201ENSMUST00000158245 112 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm24573-201ENSMUST00000175499 112 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm6003-201ENSMUST00000187903 463 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Mir1291-201ENSMUST00000199842 117 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm44478-201ENSMUST00000204875 114 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 AC151902.2-201ENSMUST00000226419 301 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm25142-201ENSMUST00000082698 107 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Snora34-201ENSMUST00000083402 138 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Pcdha4O88689 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Pcdha4O88689 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.72□□□□□ -1.97
Pcdha4O88689 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Pcdha4O88689 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm13801-201ENSMUST00000120750 160 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm23101-201ENSMUST00000157550 137 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm22483-201ENSMUST00000157986 274 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm26022-201ENSMUST00000158663 108 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm25488-201ENSMUST00000158728 118 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm22476-201ENSMUST00000158902 100 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm22500-201ENSMUST00000158982 99 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.71□□□□□ -1.98
Pcdha4O88689 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Pcdha4O88689 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm24276-201ENSMUST00000102181 110 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm24263-201ENSMUST00000104059 107 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm22674-201ENSMUST00000104413 131 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm14491-201ENSMUST00000121919 199 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm16355-201ENSMUST00000128606 231 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm22553-201ENSMUST00000157797 295 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Mir1951-201ENSMUST00000157981 89 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm24075-201ENSMUST00000158175 72 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm26405-201ENSMUST00000158495 100 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm23182-201ENSMUST00000158688 135 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm20613-201ENSMUST00000175828 345 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm44564-201ENSMUST00000207985 180 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.7□□□□□ -1.98
Pcdha4O88689 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Pcdha4O88689 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Pcdha4O88689 Snora36b-201ENSMUST00000104383 132 ntBASIC2.69□□□□□ -1.98
Pcdha4O88689 Gm24274-201ENSMUST00000116787 124 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms