Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm24079-201ENSMUST00000104352 132 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm25496-201ENSMUST00000104430 120 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm9059-201ENSMUST00000118319 183 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm25333-201ENSMUST00000158035 246 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm22945-201ENSMUST00000158557 157 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm24390-201ENSMUST00000179578 62 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm17067-202ENSMUST00000180131 123 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm44491-201ENSMUST00000196794 96 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm44468-201ENSMUST00000199516 105 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm20144-201ENSMUST00000203031 165 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm44473-201ENSMUST00000204039 152 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.38□□□□□ -2.19
Cldn1O88551 Gm46997-201ENSMUST00000222108 217 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
Cldn1O88551 mt-Tr-201ENSMUST00000082412 68 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.38□□□□□ -2.19
Cldn1O88551 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Cldn1O88551 Gm23013-201ENSMUST00000104146 106 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm12647-201ENSMUST00000118977 265 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm11572-201ENSMUST00000119164 120 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm26181-201ENSMUST00000157687 106 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC1.37□□□□□ -2.19
Cldn1O88551 Gm17052-201ENSMUST00000165496 289 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm20477-201ENSMUST00000174028 280 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm24510-201ENSMUST00000174965 94 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm25035-201ENSMUST00000175414 77 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm28016-201ENSMUST00000184594 196 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Mir7059-201ENSMUST00000184825 59 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm28661-201ENSMUST00000188231 681 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm35736-201ENSMUST00000203681 313 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm45207-201ENSMUST00000207469 145 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.37□□□□□ -2.19
Cldn1O88551 Gm11351-202ENSMUST00000225724 478 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm24624-201ENSMUST00000082617 164 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Gm24355-201ENSMUST00000082858 122 ntBASIC1.37□□□□□ -2.19
Cldn1O88551 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Cldn1O88551 Mir759-201ENSMUST00000103254 98 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm25848-201ENSMUST00000116790 144 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Cldn1O88551 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm25044-201ENSMUST00000158603 104 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm17919-201ENSMUST00000173344 312 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Mir6388-201ENSMUST00000184417 75 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm28383-201ENSMUST00000187563 139 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm29262-201ENSMUST00000190084 196 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm45456-201ENSMUST00000210841 243 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm25078-201ENSMUST00000082530 107 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Snord118-201ENSMUST00000082965 135 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Rny1-201ENSMUST00000083767 112 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Gm23851-201ENSMUST00000083831 103 ntBASIC1.36□□□□□ -2.19
Cldn1O88551 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
Cldn1O88551 Mir223-201ENSMUST00000102112 110 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm26301-201ENSMUST00000104813 95 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm12143-201ENSMUST00000119666 332 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Cldn1O88551 Gm22082-201ENSMUST00000157587 161 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm24724-201ENSMUST00000158230 107 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm23759-201ENSMUST00000158351 268 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm26405-201ENSMUST00000158495 100 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm25958-201ENSMUST00000175114 71 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.35□□□□□ -2.19
Cldn1O88551 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Cldn1O88551 Gm43220-201ENSMUST00000199299 282 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm44419-201ENSMUST00000203338 229 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 AC145736.2-201ENSMUST00000216305 365 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Gm7240-201ENSMUST00000220769 664 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Cldn1O88551 Gm23100-201ENSMUST00000083455 141 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.35□□□□□ -2.19
Cldn1O88551 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.35□□□□□ -2.19
Cldn1O88551 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm15861-201ENSMUST00000120979 339 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm22281-201ENSMUST00000157198 103 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm24262-201ENSMUST00000157431 144 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm24818-201ENSMUST00000175093 161 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm24154-201ENSMUST00000175261 130 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Mir3098-201ENSMUST00000175416 87 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm22114-201ENSMUST00000177756 107 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm25730-201ENSMUST00000178753 165 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Mir7683-201ENSMUST00000183842 61 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm27640-201ENSMUST00000184580 147 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Mir6394-201ENSMUST00000184738 99 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm34015-201ENSMUST00000194908 451 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm44858-201ENSMUST00000207360 154 ntBASIC1.34□□□□□ -2.19
Cldn1O88551 Gm45365-201ENSMUST00000209489 256 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms