Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm28257-201ENSMUST00000185244 463 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm37923-201ENSMUST00000191624 161 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm45005-201ENSMUST00000206640 157 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm5899-201ENSMUST00000071770 270 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm23454-201ENSMUST00000083332 133 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm25409-201ENSMUST00000083764 131 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm23042-201ENSMUST00000083866 101 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm10222-201ENSMUST00000088336 294 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.15□□□□□ -2.23
Col5a1O88207 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col5a1O88207 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Col5a1O88207 Gm24835-201ENSMUST00000116777 111 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm14073-201ENSMUST00000117344 381 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm11904-201ENSMUST00000120562 248 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm12924-201ENSMUST00000121747 318 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Col5a1O88207 Gm25166-201ENSMUST00000158909 111 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm25247-201ENSMUST00000175475 90 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm22114-201ENSMUST00000177756 107 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Col5a1O88207 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col5a1O88207 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm36891-201ENSMUST00000191995 655 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm43250-201ENSMUST00000196536 273 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm3724-201ENSMUST00000197957 349 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.14□□□□□ -2.23
Col5a1O88207 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Col5a1O88207 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm22443-201ENSMUST00000082890 107 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm23247-201ENSMUST00000083373 107 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Mir137-201ENSMUST00000083635 73 ntBASIC1.14□□□□□ -2.23
Col5a1O88207 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.14□□□□□ -2.23
Col5a1O88207 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Col5a1O88207 Gm24338-201ENSMUST00000104205 127 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm24282-201ENSMUST00000104232 66 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm14296-202ENSMUST00000108931 750 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm15213-201ENSMUST00000122098 216 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm25625-201ENSMUST00000157221 96 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm24908-201ENSMUST00000157294 127 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm25901-201ENSMUST00000158494 130 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm23581-201ENSMUST00000158531 63 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Mir6399-201ENSMUST00000184050 84 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm29665-201ENSMUST00000191457 528 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm43865-201ENSMUST00000204721 127 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Col5a1O88207 AC123803.1-201ENSMUST00000216093 189 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Col5a1O88207 Gm22620-201ENSMUST00000082700 133 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Gm23453-201ENSMUST00000083326 106 ntBASIC1.13□□□□□ -2.23
Col5a1O88207 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.13□□□□□ -2.23
Col5a1O88207 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Col5a1O88207 Mir872-201ENSMUST00000104728 81 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm22340-201ENSMUST00000157717 114 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm24846-201ENSMUST00000158033 108 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm23474-201ENSMUST00000158884 75 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.12□□□□□ -2.23
Col5a1O88207 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm24308-201ENSMUST00000177773 114 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm25020-201ENSMUST00000178071 107 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Mir7079-201ENSMUST00000184697 69 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm29140-201ENSMUST00000190187 476 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm37763-201ENSMUST00000193445 120 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm43680-201ENSMUST00000199466 340 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm43978-201ENSMUST00000203491 451 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm45403-201ENSMUST00000209453 276 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm40810-201ENSMUST00000219149 253 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 AC100209.2-201ENSMUST00000224461 451 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.12□□□□□ -2.23
Col5a1O88207 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.12□□□□□ -2.23
Col5a1O88207 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Col5a1O88207 Gm25992-201ENSMUST00000102437 109 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Mir875-201ENSMUST00000104698 78 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm15010-201ENSMUST00000117153 407 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm11936-201ENSMUST00000118323 160 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm15067-201ENSMUST00000119534 156 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm14748-201ENSMUST00000119819 411 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm13729-201ENSMUST00000120328 406 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm22447-201ENSMUST00000158155 92 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm24878-201ENSMUST00000158782 104 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Mir6370-201ENSMUST00000183510 120 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm43583-201ENSMUST00000199235 303 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm44024-201ENSMUST00000203008 476 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 Gm44960-201ENSMUST00000207403 141 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.12□□□□□ -2.23
Col5a1O88207 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms