Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm24632-201ENSMUST00000122770 323 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm23548-201ENSMUST00000158963 106 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm20477-201ENSMUST00000174028 280 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm27747-201ENSMUST00000184707 85 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm45344-201ENSMUST00000211610 341 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm45907-201ENSMUST00000213023 193 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm9795-201ENSMUST00000062156 693 ntBASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Trav13d-3J3QMG8 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm24283-201ENSMUST00000104233 107 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm15861-201ENSMUST00000120979 339 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm14491-201ENSMUST00000121919 199 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm22101-201ENSMUST00000157928 103 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm24277-201ENSMUST00000158661 104 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Mir7683-201ENSMUST00000183842 61 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Mir378a-201ENSMUST00000198300 66 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Mir3970-201ENSMUST00000199287 90 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Gm44977-201ENSMUST00000205283 420 ntBASIC1.69□□□□□ -2.14
Trav13d-3J3QMG8 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm26077-201ENSMUST00000104064 123 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm14883-201ENSMUST00000120179 157 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm23390-201ENSMUST00000157393 106 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm25707-201ENSMUST00000175120 96 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm5900-201ENSMUST00000179862 375 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm38019-201ENSMUST00000195133 380 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm25402-201ENSMUST00000082966 131 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Trav13d-3J3QMG8 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 Mir293-201ENSMUST00000104841 80 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 Gm11388-201ENSMUST00000120908 159 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 Gm22571-201ENSMUST00000082984 70 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 Gm26495-201ENSMUST00000083152 137 ntBASIC1.67□□□□□ -2.14
Trav13d-3J3QMG8 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Defb44-ps-201ENSMUST00000126871 219 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Mir6950-201ENSMUST00000184438 73 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Gm27544-201ENSMUST00000185069 155 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Gm37089-201ENSMUST00000195616 129 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Gm44959-201ENSMUST00000209127 231 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.66□□□□□ -2.14
Trav13d-3J3QMG8 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.65□□□□□ -2.14
Trav13d-3J3QMG8 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Gm14792-201ENSMUST00000119725 258 ntBASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Gm14922-201ENSMUST00000121131 163 ntBASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Snord87-201ENSMUST00000175437 87 ntBASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Gm27332-201ENSMUST00000184893 112 ntBASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Gm29308-201ENSMUST00000188863 315 ntBASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Gm23451-201ENSMUST00000083328 122 ntBASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Trav13d-3J3QMG8 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Mir875-201ENSMUST00000104698 78 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Trav20-201ENSMUST00000142754 347 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm24440-201ENSMUST00000157236 63 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm24512-201ENSMUST00000174963 65 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm25615-201ENSMUST00000177836 94 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm23003-201ENSMUST00000179948 107 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm37889-201ENSMUST00000194174 251 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 AC165092.3-201ENSMUST00000223602 282 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm22248-201ENSMUST00000082482 150 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Mir322-201ENSMUST00000083484 95 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm23039-201ENSMUST00000083870 161 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm10360-201ENSMUST00000097219 272 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.64□□□□□ -2.15
Trav13d-3J3QMG8 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Gm25090-201ENSMUST00000104000 132 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Gm15692-201ENSMUST00000152173 352 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Gm24668-201ENSMUST00000158935 104 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Gm26864-201ENSMUST00000181346 156 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Mir6540-201ENSMUST00000184886 108 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Gm29657-201ENSMUST00000189807 342 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Gm44352-201ENSMUST00000196358 110 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 Mir7217-201ENSMUST00000200304 62 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.63□□□□□ -2.15
Trav13d-3J3QMG8 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms