Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Gm19280-201ENSMUST00000190191 205 ntBASIC-0.16□□□□□ -2.44
Col6a5A6H584 Gm28559-201ENSMUST00000190532 139 ntBASIC-0.16□□□□□ -2.44
Col6a5A6H584 Gm28992-201ENSMUST00000190534 139 ntBASIC-0.16□□□□□ -2.44
Col6a5A6H584 Gm18747-201ENSMUST00000198129 648 ntBASIC-0.16□□□□□ -2.44
Col6a5A6H584 Gm26329-201ENSMUST00000093723 110 ntBASIC-0.16□□□□□ -2.44
Col6a5A6H584 Gm42721-201ENSMUST00000197165 1523 ntBASIC-0.16□□□□□ -2.44
Col6a5A6H584 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23184-201ENSMUST00000122594 131 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm22027-201ENSMUST00000122737 127 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Snora81-201ENSMUST00000157310 178 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23390-201ENSMUST00000157393 106 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Scarna3a-201ENSMUST00000158911 140 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm22708-201ENSMUST00000158987 103 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm26914-201ENSMUST00000182262 223 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm37727-201ENSMUST00000191637 819 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Trbv25-201ENSMUST00000194700 273 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm37116-201ENSMUST00000195161 147 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm19326-201ENSMUST00000219818 326 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Mir667-201ENSMUST00000102441 92 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm14626-201ENSMUST00000117619 216 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm11575-201ENSMUST00000122243 228 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm22814-201ENSMUST00000157452 104 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm2962-201ENSMUST00000159266 336 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Mir5104-201ENSMUST00000175319 94 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm27878-201ENSMUST00000184000 106 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Mir703-201ENSMUST00000197105 109 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm43367-201ENSMUST00000199986 625 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Igkv13-82-201ENSMUST00000200308 346 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm44404-201ENSMUST00000203979 636 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm9795-201ENSMUST00000062156 693 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm24522-201ENSMUST00000083964 108 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm14677-201ENSMUST00000117866 486 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm12647-201ENSMUST00000118977 265 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm14554-201ENSMUST00000119548 661 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm7846-201ENSMUST00000145844 274 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23838-201ENSMUST00000158067 162 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23415-201ENSMUST00000175519 83 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23002-201ENSMUST00000179221 107 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm25473-201ENSMUST00000180191 107 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm10105-201ENSMUST00000184601 270 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm19572-201ENSMUST00000214326 338 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 AC153526.1-201ENSMUST00000219750 190 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 AC124772.1-201ENSMUST00000221325 151 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm23509-201ENSMUST00000083080 160 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 Gm24494-201ENSMUST00000083804 81 ntBASIC-0.17□□□□□ -2.44
Col6a5A6H584 AC124426.1-203ENSMUST00000221814 1362 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm22071-201ENSMUST00000116857 83 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm14852-201ENSMUST00000120065 647 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm24959-201ENSMUST00000157924 146 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm24634-201ENSMUST00000158672 107 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Snord123-201ENSMUST00000158692 71 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm25839-201ENSMUST00000158921 103 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Mir344d-3-201ENSMUST00000175458 80 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm25525-201ENSMUST00000177701 107 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Mir6338-201ENSMUST00000183389 109 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm28016-201ENSMUST00000184594 196 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm38295-201ENSMUST00000191951 151 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Mir376b-201ENSMUST00000195930 82 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm43993-201ENSMUST00000203972 247 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm45146-201ENSMUST00000207108 221 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC-0.18□□□□□ -2.44
Col6a5A6H584 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm7495-201ENSMUST00000215099 426 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Col6a5A6H584 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Col6a5A6H584 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm23246-201ENSMUST00000083371 67 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm26175-201ENSMUST00000083794 131 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm24164-201ENSMUST00000093663 104 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm24171-201ENSMUST00000104126 131 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm11606-201ENSMUST00000120706 617 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm14922-201ENSMUST00000121131 163 ntBASIC-0.18□□□□□ -2.44
Col6a5A6H584 Gm23853-201ENSMUST00000158375 104 ntBASIC-0.18□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms