Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm29180-201ENSMUST00000190003 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29575-201ENSMUST00000190597 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm28160-201ENSMUST00000191229 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm29469-201ENSMUST00000191448 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm19777-201ENSMUST00000191940 358 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm37129-201ENSMUST00000195791 315 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm24615-201ENSMUST00000083268 113 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Mir429-201ENSMUST00000083493 83 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Gm22723-201ENSMUST00000083820 129 ntBASIC1.88□□□□□ -2.11
Cpsf3Q9QXK7 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm25279-201ENSMUST00000122608 133 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm23759-201ENSMUST00000158351 268 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm22768-201ENSMUST00000158366 153 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm46997-201ENSMUST00000222108 217 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm11351-202ENSMUST00000225724 478 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 Gm22299-201ENSMUST00000082663 136 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.87□□□□□ -2.11
Cpsf3Q9QXK7 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Gm24079-201ENSMUST00000104352 132 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Gm13588-201ENSMUST00000120026 135 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 U6.1-201ENSMUST00000157443 101 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Gm22814-201ENSMUST00000157452 104 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Gm22215-201ENSMUST00000157558 96 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Gm17052-201ENSMUST00000165496 289 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Gm29665-201ENSMUST00000191457 528 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.86□□□□□ -2.11
Cpsf3Q9QXK7 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Mir374b-201ENSMUST00000102314 95 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm22281-201ENSMUST00000157198 103 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm24572-201ENSMUST00000175505 88 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Mir6379-201ENSMUST00000183392 115 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm27511-201ENSMUST00000183502 127 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm43220-201ENSMUST00000199299 282 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm35736-201ENSMUST00000203681 313 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm45616-201ENSMUST00000211711 319 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm24625-201ENSMUST00000082622 130 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm25930-201ENSMUST00000082785 107 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm22294-201ENSMUST00000083308 104 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm23845-201ENSMUST00000083834 152 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Gm10360-201ENSMUST00000097219 272 ntBASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Cpsf3Q9QXK7 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm23013-201ENSMUST00000104146 106 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Mir3096-201ENSMUST00000116685 71 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm13714-201ENSMUST00000117313 221 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm15002-201ENSMUST00000118406 452 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm24818-201ENSMUST00000175093 161 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm26435-201ENSMUST00000179026 107 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Mir7225-201ENSMUST00000184178 54 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm32175-201ENSMUST00000193641 346 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm23406-201ENSMUST00000082537 122 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm25789-201ENSMUST00000083294 76 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Cpsf3Q9QXK7 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.84□□□□□ -2.12
Cpsf3Q9QXK7 Gm22761-201ENSMUST00000102278 96 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm11794-201ENSMUST00000119446 237 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm15067-201ENSMUST00000119534 156 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm22537-201ENSMUST00000158172 199 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm22510-201ENSMUST00000179304 79 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm26336-201ENSMUST00000179449 79 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm26390-201ENSMUST00000179628 79 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Mir7683-201ENSMUST00000183842 61 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm27997-201ENSMUST00000184942 69 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm29657-201ENSMUST00000189807 342 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm37918-201ENSMUST00000192071 120 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm43406-201ENSMUST00000200356 334 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm25793-201ENSMUST00000083287 107 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Gm24163-201ENSMUST00000093660 132 ntBASIC1.83□□□□□ -2.12
Cpsf3Q9QXK7 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm12143-201ENSMUST00000119666 332 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm23172-201ENSMUST00000157160 124 ntBASIC1.82□□□□□ -2.12
Cpsf3Q9QXK7 Gm23670-201ENSMUST00000157469 119 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 185 ms