Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.56□□□□□ -2.16
Scn5aQ9JJV9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Scn5aQ9JJV9 Gm24356-201ENSMUST00000082859 106 ntBASIC1.56□□□□□ -2.16
Scn5aQ9JJV9 Gm22287-201ENSMUST00000083197 107 ntBASIC1.56□□□□□ -2.16
Scn5aQ9JJV9 Gm23845-201ENSMUST00000083834 152 ntBASIC1.56□□□□□ -2.16
Scn5aQ9JJV9 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm23214-201ENSMUST00000122716 157 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm22731-201ENSMUST00000158086 94 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm22945-201ENSMUST00000158557 157 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm16162-201ENSMUST00000162296 297 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm36891-201ENSMUST00000191995 655 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm44373-201ENSMUST00000196112 169 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 mt-Td-201ENSMUST00000082404 70 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Gm23041-201ENSMUST00000083868 106 ntBASIC1.55□□□□□ -2.16
Scn5aQ9JJV9 Mir374b-201ENSMUST00000102314 95 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm23013-201ENSMUST00000104146 106 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm13885-201ENSMUST00000117569 187 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm25269-201ENSMUST00000122601 104 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm22386-201ENSMUST00000158192 129 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Mir3086-201ENSMUST00000175072 87 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm26435-201ENSMUST00000179026 107 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm22299-201ENSMUST00000082663 136 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm24805-201ENSMUST00000082931 104 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm25996-201ENSMUST00000175393 117 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm25253-201ENSMUST00000179958 107 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm28995-201ENSMUST00000186625 261 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm20923-201ENSMUST00000190009 319 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm21088-201ENSMUST00000190875 316 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Mir6962-201ENSMUST00000199512 63 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm24037-201ENSMUST00000082871 180 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
Scn5aQ9JJV9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Mir223-201ENSMUST00000102112 110 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm11798-201ENSMUST00000119150 421 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm23474-201ENSMUST00000158884 75 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm25730-201ENSMUST00000178753 165 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm25933-201ENSMUST00000178943 108 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm43220-201ENSMUST00000199299 282 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Gm24615-201ENSMUST00000083268 113 ntBASIC1.53□□□□□ -2.16
Scn5aQ9JJV9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
Scn5aQ9JJV9 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Mir3096-201ENSMUST00000116685 71 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm25805-201ENSMUST00000122788 108 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm23982-201ENSMUST00000157141 106 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm23120-201ENSMUST00000157654 287 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm23641-201ENSMUST00000157857 101 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Mir8119-201ENSMUST00000183371 129 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm44055-201ENSMUST00000204376 247 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm24625-201ENSMUST00000082622 130 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm12304-201ENSMUST00000120312 385 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm24632-201ENSMUST00000122770 323 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm22228-201ENSMUST00000157364 101 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm27668-201ENSMUST00000184188 120 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm42960-201ENSMUST00000202160 241 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm43914-201ENSMUST00000203592 594 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm44655-201ENSMUST00000207768 423 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Mir107-201ENSMUST00000083660 87 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.52□□□□□ -2.17
Scn5aQ9JJV9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm25781-201ENSMUST00000122527 84 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm44409-201ENSMUST00000198810 166 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Mir3970-201ENSMUST00000199287 90 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm24165-201ENSMUST00000082718 128 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Mir429-201ENSMUST00000083493 83 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Gm23731-201ENSMUST00000083749 107 ntBASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
Scn5aQ9JJV9 Mir343-201ENSMUST00000102360 75 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm22221-201ENSMUST00000157362 103 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Snord87-201ENSMUST00000175437 87 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm22800-201ENSMUST00000175627 94 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm25450-201ENSMUST00000179144 107 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Gm25457-201ENSMUST00000179509 107 ntBASIC1.5□□□□□ -2.17
Scn5aQ9JJV9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms