Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm12771-201ENSMUST00000120246 135 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm12926-201ENSMUST00000121158 409 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm25888-201ENSMUST00000157778 302 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm2962-201ENSMUST00000159266 336 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm23002-201ENSMUST00000179221 107 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Mir3087-201ENSMUST00000199405 56 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm43993-201ENSMUST00000203972 247 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.39□□□□□ -2.03
Nkx2-4Q9EQM3 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm13885-201ENSMUST00000117569 187 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm12417-201ENSMUST00000119153 403 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm22883-201ENSMUST00000157376 106 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24480-201ENSMUST00000157442 103 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm22483-201ENSMUST00000157986 274 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm25933-201ENSMUST00000178943 108 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm19123-201ENSMUST00000190716 651 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm45543-201ENSMUST00000209327 88 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm45907-201ENSMUST00000213023 193 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24966-201ENSMUST00000082443 79 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm25482-201ENSMUST00000083225 107 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24163-201ENSMUST00000093660 132 ntBASIC2.38□□□□□ -2.03
Nkx2-4Q9EQM3 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Mir541-201ENSMUST00000102097 90 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Mir758-201ENSMUST00000103260 81 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm23836-201ENSMUST00000104434 129 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Trav20-201ENSMUST00000142754 347 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm22145-201ENSMUST00000157396 148 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm23219-201ENSMUST00000158123 87 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24304-201ENSMUST00000177635 107 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm27793-201ENSMUST00000183405 76 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm29022-201ENSMUST00000190702 225 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm43676-201ENSMUST00000197532 540 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm19118-201ENSMUST00000222554 98 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24204-201ENSMUST00000082950 107 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm26126-201ENSMUST00000083188 164 ntBASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Nkx2-4Q9EQM3 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm23060-201ENSMUST00000102345 109 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm23535-201ENSMUST00000157542 106 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24006-201ENSMUST00000158462 132 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Snord11-201ENSMUST00000158468 84 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Mir669n-201ENSMUST00000158636 54 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24573-201ENSMUST00000175499 112 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm42774-201ENSMUST00000198854 283 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm44533-201ENSMUST00000207782 268 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.36□□□□□ -2.03
Nkx2-4Q9EQM3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 Gm25488-201ENSMUST00000158728 118 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 Gm27421-201ENSMUST00000184729 167 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 Gm25789-201ENSMUST00000083294 76 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24164-201ENSMUST00000093663 104 ntBASIC2.35□□□□□ -2.03
Nkx2-4Q9EQM3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24121-201ENSMUST00000102029 106 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm24867-201ENSMUST00000104161 107 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm22486-201ENSMUST00000116815 137 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm25115-201ENSMUST00000157187 140 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm37746-201ENSMUST00000193249 198 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Nkx2-4Q9EQM3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Nkx2-4Q9EQM3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Nkx2-4Q9EQM3 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Nkx2-4Q9EQM3 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Mir542-201ENSMUST00000102186 85 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Gm23492-201ENSMUST00000116837 115 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Gm23109-201ENSMUST00000116867 126 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Gm22193-201ENSMUST00000116868 76 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Gm24896-201ENSMUST00000122741 135 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Gm23043-201ENSMUST00000157890 109 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Mir1936-201ENSMUST00000158699 93 ntBASIC2.33□□□□□ -2.04
Nkx2-4Q9EQM3 Gm22259-201ENSMUST00000178926 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms