Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.88□□□□□ -1.95
Ushbp1Q8R370 AC154636.2-201ENSMUST00000222538 161 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 AC154213.2-201ENSMUST00000227138 187 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.88□□□□□ -1.95
Ushbp1Q8R370 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.88□□□□□ -1.95
Ushbp1Q8R370 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Ushbp1Q8R370 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm23951-201ENSMUST00000104029 132 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm23600-201ENSMUST00000157260 71 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm23536-201ENSMUST00000157541 134 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm25428-201ENSMUST00000157608 114 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Mir3569-201ENSMUST00000185080 58 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm26265-202ENSMUST00000196326 133 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm44563-201ENSMUST00000207958 178 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC2.87□□□□□ -1.95
Ushbp1Q8R370 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm25589-201ENSMUST00000082502 166 ntBASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Ushbp1Q8R370 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm23492-201ENSMUST00000116837 115 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Mir1967-201ENSMUST00000157789 82 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm25866-201ENSMUST00000158245 112 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm25488-201ENSMUST00000158728 118 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Mir3075-201ENSMUST00000175340 85 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm23571-201ENSMUST00000180073 127 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm27928-201ENSMUST00000183747 256 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm27753-201ENSMUST00000184742 203 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm37624-201ENSMUST00000193751 219 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm25820-201ENSMUST00000198589 127 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm6796-201ENSMUST00000211919 243 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm19118-201ENSMUST00000222554 98 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm25789-201ENSMUST00000083294 76 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Gm23249-201ENSMUST00000083369 161 ntBASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Ushbp1Q8R370 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm23578-201ENSMUST00000103943 104 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm24280-201ENSMUST00000104237 134 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm13588-201ENSMUST00000120026 135 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm23599-201ENSMUST00000157261 251 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm25059-201ENSMUST00000157367 117 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm24480-201ENSMUST00000157442 103 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm23584-201ENSMUST00000157655 129 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm24436-201ENSMUST00000157889 302 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm25933-201ENSMUST00000178943 108 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm27465-201ENSMUST00000184290 91 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.85□□□□□ -1.95
Ushbp1Q8R370 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm43993-201ENSMUST00000203972 247 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Mir127-201ENSMUST00000093568 70 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm10360-201ENSMUST00000097219 272 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.85□□□□□ -1.95
Ushbp1Q8R370 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm24670-201ENSMUST00000104154 132 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm13862-201ENSMUST00000121220 197 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm22217-201ENSMUST00000157556 313 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm22337-201ENSMUST00000157721 132 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm25888-201ENSMUST00000157778 302 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm27585-201ENSMUST00000183717 199 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm28169-201ENSMUST00000190342 345 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.84□□□□□ -1.95
Ushbp1Q8R370 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.84□□□□□ -1.96
Ushbp1Q8R370 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Ushbp1Q8R370 Mir466p-201ENSMUST00000103925 89 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm26015-201ENSMUST00000104402 125 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm22151-201ENSMUST00000116963 58 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm12926-201ENSMUST00000121158 409 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm16355-201ENSMUST00000128606 231 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm22286-201ENSMUST00000179708 107 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm25253-201ENSMUST00000179958 107 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm43427-201ENSMUST00000198188 331 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Gm43264-201ENSMUST00000202284 325 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Mir146-201ENSMUST00000083667 65 ntBASIC2.83□□□□□ -1.96
Ushbp1Q8R370 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Gm22551-201ENSMUST00000157795 103 ntBASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Gm22767-201ENSMUST00000158365 165 ntBASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Gm32175-201ENSMUST00000193641 346 ntBASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Gm26204-201ENSMUST00000082906 107 ntBASIC2.82□□□□□ -1.96
Ushbp1Q8R370 Mir410-201ENSMUST00000083563 81 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms