Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC2.78□□□□□ -1.96
Vps53Q8CCB4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.78□□□□□ -1.96
Vps53Q8CCB4 AC173482.5-201ENSMUST00000224181 327 ntBASIC2.78□□□□□ -1.96
Vps53Q8CCB4 Gm24355-201ENSMUST00000082858 122 ntBASIC2.78□□□□□ -1.96
Vps53Q8CCB4 Gm24163-201ENSMUST00000093660 132 ntBASIC2.78□□□□□ -1.96
Vps53Q8CCB4 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Vps53Q8CCB4 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.78□□□□□ -1.96
Vps53Q8CCB4 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm14588-201ENSMUST00000119895 172 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm24750-201ENSMUST00000157843 104 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm25015-201ENSMUST00000158400 128 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm25020-201ENSMUST00000178071 107 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm3852-201ENSMUST00000182781 264 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Mir6905-201ENSMUST00000184228 70 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Mir7009-201ENSMUST00000184519 64 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Mir6925-201ENSMUST00000197857 70 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm44459-201ENSMUST00000203926 160 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 AC098718.2-201ENSMUST00000226822 285 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 Gm22973-201ENSMUST00000083298 191 ntBASIC2.77□□□□□ -1.97
Vps53Q8CCB4 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm23011-201ENSMUST00000104148 132 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Snord19-201ENSMUST00000104609 76 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm13756-201ENSMUST00000117618 222 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm14602-201ENSMUST00000118625 340 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm26279-201ENSMUST00000157095 102 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm19901-201ENSMUST00000192191 495 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm43626-201ENSMUST00000198575 162 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm44477-201ENSMUST00000199661 110 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Mir423-201ENSMUST00000083584 109 ntBASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Vps53Q8CCB4 Gm22752-201ENSMUST00000102083 109 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm23492-201ENSMUST00000116837 115 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm12926-201ENSMUST00000121158 409 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm15365-201ENSMUST00000122392 300 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm23466-201ENSMUST00000157133 106 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm22097-201ENSMUST00000157929 278 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm27793-201ENSMUST00000183405 76 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm44478-201ENSMUST00000204875 114 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm45002-201ENSMUST00000208045 120 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Gm26265-201ENSMUST00000083277 135 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Mir471-201ENSMUST00000093596 67 ntBASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.75□□□□□ -1.97
Vps53Q8CCB4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Gm6829-201ENSMUST00000119858 360 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Gm26026-201ENSMUST00000122726 123 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Gm22517-201ENSMUST00000158265 136 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Gm23005-201ENSMUST00000158950 136 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Gm43193-201ENSMUST00000197732 441 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Vps53Q8CCB4 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Gm25628-201ENSMUST00000084002 105 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.74□□□□□ -1.97
Vps53Q8CCB4 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm23951-201ENSMUST00000104029 132 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm6954-201ENSMUST00000117416 225 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm12513-201ENSMUST00000118617 352 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm24911-201ENSMUST00000157292 136 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Mir1967-201ENSMUST00000157789 82 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm24813-201ENSMUST00000175310 84 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm22800-201ENSMUST00000175627 94 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm37037-201ENSMUST00000194475 424 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 AC173345.2-201ENSMUST00000222795 153 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 AC183092.1-201ENSMUST00000224301 153 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm25130-201ENSMUST00000082650 156 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm25789-201ENSMUST00000083294 76 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Gm23040-201ENSMUST00000083869 163 ntBASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Vps53Q8CCB4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm2830-201ENSMUST00000140330 385 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm22217-201ENSMUST00000157556 313 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm17052-201ENSMUST00000165496 289 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm22264-201ENSMUST00000178200 107 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm44563-201ENSMUST00000207958 178 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm25589-201ENSMUST00000082502 166 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.72□□□□□ -1.97
Vps53Q8CCB4 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Vps53Q8CCB4 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Vps53Q8CCB4 Gm22678-201ENSMUST00000116974 101 ntBASIC2.71□□□□□ -1.98
Vps53Q8CCB4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.71□□□□□ -1.98
Vps53Q8CCB4 Gm22842-201ENSMUST00000157709 118 ntBASIC2.71□□□□□ -1.98
Vps53Q8CCB4 Gm43993-201ENSMUST00000203972 247 ntBASIC2.71□□□□□ -1.98
Vps53Q8CCB4 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms