Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm25635-201ENSMUST00000082675 131 ntBASIC4.47□□□□□ -1.69
Trim35Q8C006 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim35Q8C006 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim35Q8C006 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.47□□□□□ -1.69
Trim35Q8C006 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim35Q8C006 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim35Q8C006 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Trim35Q8C006 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Trim35Q8C006 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim35Q8C006 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim35Q8C006 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim35Q8C006 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim35Q8C006 Gm23014-201ENSMUST00000104144 130 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 Gm22859-201ENSMUST00000174978 122 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 Gm27189-201ENSMUST00000184119 190 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 Gm27568-201ENSMUST00000184220 99 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 Gm3145-201ENSMUST00000188584 220 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 AC130477.2-201ENSMUST00000228158 274 ntBASIC4.46□□□□□ -1.7
Trim35Q8C006 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim35Q8C006 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Trim35Q8C006 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim35Q8C006 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
Trim35Q8C006 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim35Q8C006 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Trim35Q8C006 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Trim35Q8C006 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm25447-201ENSMUST00000158997 128 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm22243-201ENSMUST00000178754 120 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm27564-201ENSMUST00000185196 96 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm37670-201ENSMUST00000193622 229 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm37836-201ENSMUST00000195875 175 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 Gm44459-201ENSMUST00000203926 160 ntBASIC4.45□□□□□ -1.7
Trim35Q8C006 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim35Q8C006 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Trim35Q8C006 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Trim35Q8C006 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Trim35Q8C006 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Trim35Q8C006 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim35Q8C006 n-R5s73-201ENSMUST00000122508 107 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.44□□□□□ -1.7
Trim35Q8C006 Gm22279-201ENSMUST00000157200 93 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 Gm27419-201ENSMUST00000184576 109 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC4.44□□□□□ -1.7
Trim35Q8C006 Gm9370-201ENSMUST00000222787 609 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Trim35Q8C006 Gm42675-201ENSMUST00000197552 4035 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.44□□□□□ -1.7
Trim35Q8C006 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm25609-201ENSMUST00000104019 104 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm22514-201ENSMUST00000122547 308 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm22227-201ENSMUST00000157356 259 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm24725-201ENSMUST00000158229 125 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm22516-201ENSMUST00000158266 124 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm15796-201ENSMUST00000162135 204 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm26398-201ENSMUST00000179015 127 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm26073-201ENSMUST00000179906 127 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm27286-201ENSMUST00000184934 179 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm3338-201ENSMUST00000220982 269 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gm25652-201ENSMUST00000083780 103 ntBASIC4.43□□□□□ -1.7
Trim35Q8C006 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim35Q8C006 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim35Q8C006 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm25537-201ENSMUST00000103851 109 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm24632-201ENSMUST00000122770 323 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm24221-201ENSMUST00000158833 313 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm27883-201ENSMUST00000183941 102 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm27805-201ENSMUST00000184513 79 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm44376-201ENSMUST00000197570 128 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm35736-201ENSMUST00000203681 313 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm25899-201ENSMUST00000082672 141 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Mir504-201ENSMUST00000093602 79 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim35Q8C006 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.42□□□□□ -1.7
Trim35Q8C006 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim35Q8C006 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim35Q8C006 AL645643.1-201ENSMUST00000222438 3897 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim35Q8C006 Gm25756-201ENSMUST00000103990 136 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Gm12252-201ENSMUST00000119517 219 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Gm24000-201ENSMUST00000158063 89 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Mir6943-201ENSMUST00000185186 66 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Gm8069-201ENSMUST00000197887 154 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Gm43925-201ENSMUST00000203498 206 ntBASIC4.41□□□□□ -1.7
Trim35Q8C006 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim35Q8C006 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim35Q8C006 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim35Q8C006 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim35Q8C006 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms