Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC-0.01□□□□□ -2.41
Col16a1Q8BLX7 Mir340-201ENSMUST00000083483 98 ntBASIC-0.01□□□□□ -2.41
Col16a1Q8BLX7 Gm25088-201ENSMUST00000101803 79 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm22193-201ENSMUST00000116868 76 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm24784-201ENSMUST00000157640 62 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Mir452-201ENSMUST00000093629 85 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Mir687-201ENSMUST00000102166 89 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm14946-201ENSMUST00000119859 296 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm14846-201ENSMUST00000121868 216 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm23754-201ENSMUST00000157576 63 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm18396-201ENSMUST00000177095 361 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm26177-201ENSMUST00000178683 107 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm4076-201ENSMUST00000179230 965 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Mir703-201ENSMUST00000197105 109 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm45541-201ENSMUST00000210443 54 ntBASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC-0.02□□□□□ -2.41
Col16a1Q8BLX7 Gm12837-201ENSMUST00000120131 373 ntBASIC-0.03□□□□□ -2.41
Col16a1Q8BLX7 Gm25194-201ENSMUST00000177987 79 ntBASIC-0.03□□□□□ -2.41
Col16a1Q8BLX7 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Col16a1Q8BLX7 Gm44137-201ENSMUST00000203670 367 ntBASIC-0.03□□□□□ -2.41
Col16a1Q8BLX7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC-0.03□□□□□ -2.41
Col16a1Q8BLX7 AC124569.1-201ENSMUST00000225932 101 ntBASIC-0.03□□□□□ -2.41
Col16a1Q8BLX7 Gm15914-201ENSMUST00000161922 309 ntBASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 Gm27715-201ENSMUST00000184714 260 ntBASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 Gm19032-201ENSMUST00000208584 592 ntBASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 AC192334.2-201ENSMUST00000223087 1091 ntBASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 Snord82-201ENSMUST00000082889 70 ntBASIC-0.04□□□□□ -2.42
Col16a1Q8BLX7 Gm11792-201ENSMUST00000120640 168 ntBASIC-0.05□□□□□ -2.42
Col16a1Q8BLX7 Gm12881-201ENSMUST00000121191 203 ntBASIC-0.05□□□□□ -2.42
Col16a1Q8BLX7 Gm6568-201ENSMUST00000122274 697 ntBASIC-0.05□□□□□ -2.42
Col16a1Q8BLX7 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC-0.05□□□□□ -2.42
Col16a1Q8BLX7 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm15175-201ENSMUST00000117629 132 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm25558-201ENSMUST00000158083 106 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm25156-201ENSMUST00000179809 79 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm23648-201ENSMUST00000180301 107 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm42475-201ENSMUST00000201212 295 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm23506-201ENSMUST00000083077 107 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm12106-201ENSMUST00000116006 1200 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm23078-201ENSMUST00000157848 148 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm22076-201ENSMUST00000158601 84 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm37923-201ENSMUST00000191624 161 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm37757-201ENSMUST00000193072 210 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm22704-201ENSMUST00000083027 137 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.06□□□□□ -2.42
Col16a1Q8BLX7 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm15529-201ENSMUST00000121833 994 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm25413-201ENSMUST00000158544 312 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm23821-201ENSMUST00000158738 106 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm27428-201ENSMUST00000184289 110 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm18971-201ENSMUST00000197240 374 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm20144-201ENSMUST00000203031 165 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.07□□□□□ -2.42
Col16a1Q8BLX7 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Gm2020-201ENSMUST00000145242 579 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Gm20543-201ENSMUST00000174200 726 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Gm42976-201ENSMUST00000200313 222 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.08□□□□□ -2.42
Col16a1Q8BLX7 Gm23068-201ENSMUST00000158239 293 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 Gm25120-201ENSMUST00000180148 79 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 AC162931.1-201ENSMUST00000214184 267 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 AC153957.1-201ENSMUST00000215235 229 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 AC109212.1-201ENSMUST00000215561 427 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 Gm24038-201ENSMUST00000082872 159 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 Gm22577-201ENSMUST00000083731 109 ntBASIC-0.09□□□□□ -2.42
Col16a1Q8BLX7 Gm11410-201ENSMUST00000120053 1143 ntBASIC-0.1□□□□□ -2.42
Col16a1Q8BLX7 Gm14491-201ENSMUST00000121919 199 ntBASIC-0.1□□□□□ -2.42
Col16a1Q8BLX7 Gm25269-201ENSMUST00000122601 104 ntBASIC-0.1□□□□□ -2.42
Col16a1Q8BLX7 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.1□□□□□ -2.42
Col16a1Q8BLX7 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.1□□□□□ -2.42
Col16a1Q8BLX7 Gm14400-201ENSMUST00000117234 2135 ntBASIC-0.1□□□□□ -2.42
Col16a1Q8BLX7 AC102369.2-201ENSMUST00000219725 1679 ntBASIC-0.1□□□□□ -2.43
Col16a1Q8BLX7 Gm37630-201ENSMUST00000194210 1456 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms