Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm24878-201ENSMUST00000158782 104 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm22775-201ENSMUST00000177630 120 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm23569-201ENSMUST00000180120 120 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Mir7014-201ENSMUST00000183853 63 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Mir7050-201ENSMUST00000184636 60 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm28992-201ENSMUST00000190534 139 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm22622-201ENSMUST00000082870 129 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm24929-201ENSMUST00000083403 139 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Shkbp1Q6P7W2 Gm22003-201ENSMUST00000101885 107 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm24141-201ENSMUST00000122776 115 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm23559-201ENSMUST00000157824 103 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm24846-201ENSMUST00000158033 108 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm22330-201ENSMUST00000158068 115 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm25707-201ENSMUST00000175120 96 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm24388-201ENSMUST00000177872 107 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm22756-201ENSMUST00000180118 107 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm20058-201ENSMUST00000186939 284 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm37807-201ENSMUST00000194310 190 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm34139-201ENSMUST00000196166 294 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm42834-201ENSMUST00000196845 256 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm26054-201ENSMUST00000083037 107 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm24492-201ENSMUST00000083798 107 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
Shkbp1Q6P7W2 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm24670-201ENSMUST00000104154 132 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm23101-201ENSMUST00000157550 137 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm23260-201ENSMUST00000158317 172 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm4468-201ENSMUST00000170206 294 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Mir7667-201ENSMUST00000183866 63 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm37428-201ENSMUST00000193886 137 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm44425-201ENSMUST00000203739 429 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm23850-201ENSMUST00000083830 169 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm10172-201ENSMUST00000085929 558 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Gm23947-201ENSMUST00000093636 107 ntBASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Shkbp1Q6P7W2 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm14491-201ENSMUST00000121919 199 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm26049-201ENSMUST00000157313 108 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm23535-201ENSMUST00000157542 106 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm23895-201ENSMUST00000158108 160 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm24075-201ENSMUST00000158175 72 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm23182-201ENSMUST00000158688 135 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm43676-201ENSMUST00000197532 540 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm42739-201ENSMUST00000200687 226 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm45492-201ENSMUST00000211611 288 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm24625-201ENSMUST00000082622 130 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Gm24449-201ENSMUST00000083985 106 ntBASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Shkbp1Q6P7W2 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm25529-201ENSMUST00000104850 92 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm9009-201ENSMUST00000117321 326 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm11253-201ENSMUST00000118486 201 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm23230-201ENSMUST00000157298 133 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm26405-201ENSMUST00000158495 100 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Mir1936-201ENSMUST00000158699 93 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm25198-201ENSMUST00000178574 110 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm37918-201ENSMUST00000192071 120 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm9251-201ENSMUST00000197202 628 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm11351-202ENSMUST00000225724 478 ntBASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
Shkbp1Q6P7W2 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Gm23803-201ENSMUST00000104610 132 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Gm22586-201ENSMUST00000157507 122 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Gm24358-201ENSMUST00000158424 288 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Gm25476-201ENSMUST00000175125 185 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Mir5118-201ENSMUST00000175551 67 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Mir5136-201ENSMUST00000175573 76 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.75□□□□□ -1.97
Shkbp1Q6P7W2 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Shkbp1Q6P7W2 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 221.3 ms