Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
Trim28Q62318 Gm26081-201ENSMUST00000104068 132 ntBASIC3.1□□□□□ -1.91
Trim28Q62318 Gm25377-201ENSMUST00000104334 129 ntBASIC3.1□□□□□ -1.91
Trim28Q62318 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim28Q62318 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.1□□□□□ -1.91
Trim28Q62318 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim28Q62318 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim28Q62318 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.1□□□□□ -1.91
Trim28Q62318 Gm40810-201ENSMUST00000219149 253 ntBASIC3.1□□□□□ -1.91
Trim28Q62318 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.1□□□□□ -1.91
Trim28Q62318 Gm8508-201ENSMUST00000061226 363 ntBASIC3.1□□□□□ -1.91
Trim28Q62318 Gm24356-201ENSMUST00000082859 106 ntBASIC3.1□□□□□ -1.91
Trim28Q62318 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trim28Q62318 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Trim28Q62318 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
Trim28Q62318 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim28Q62318 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim28Q62318 Gm24916-201ENSMUST00000157287 79 ntBASIC3.09□□□□□ -1.91
Trim28Q62318 Gm27399-201ENSMUST00000184250 78 ntBASIC3.09□□□□□ -1.91
Trim28Q62318 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC3.09□□□□□ -1.91
Trim28Q62318 Gm44477-201ENSMUST00000199661 110 ntBASIC3.09□□□□□ -1.91
Trim28Q62318 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim28Q62318 Snord14d-201ENSMUST00000083424 86 ntBASIC3.09□□□□□ -1.91
Trim28Q62318 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.09□□□□□ -1.92
Trim28Q62318 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Trim28Q62318 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Trim28Q62318 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim28Q62318 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Trim28Q62318 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Trim28Q62318 Gm24282-201ENSMUST00000104232 66 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm26015-201ENSMUST00000104402 125 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm26341-201ENSMUST00000104561 134 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm22476-201ENSMUST00000158902 100 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm16546-201ENSMUST00000159442 355 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.08□□□□□ -1.92
Trim28Q62318 Gm9251-201ENSMUST00000197202 628 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Snora19-201ENSMUST00000082962 132 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm23658-201ENSMUST00000083233 132 ntBASIC3.08□□□□□ -1.92
Trim28Q62318 Gm25089-201ENSMUST00000102015 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22373-201ENSMUST00000104584 89 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Mir1298-201ENSMUST00000116681 98 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm12143-201ENSMUST00000119666 332 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22966-201ENSMUST00000157957 129 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23223-201ENSMUST00000158119 127 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22775-201ENSMUST00000177630 120 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm25840-201ENSMUST00000177821 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm24952-201ENSMUST00000177909 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23682-201ENSMUST00000178146 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm24652-201ENSMUST00000178223 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22629-201ENSMUST00000178272 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm24021-201ENSMUST00000178435 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22274-201ENSMUST00000178441 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22050-201ENSMUST00000178442 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23688-201ENSMUST00000178502 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23944-201ENSMUST00000178607 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm26283-201ENSMUST00000178625 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm25452-201ENSMUST00000178776 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23286-201ENSMUST00000178963 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm22640-201ENSMUST00000179035 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm25984-201ENSMUST00000179129 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm25585-201ENSMUST00000179469 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm26374-201ENSMUST00000179737 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm24040-201ENSMUST00000179786 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm25017-201ENSMUST00000179805 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23618-201ENSMUST00000179912 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm26284-201ENSMUST00000180107 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm23569-201ENSMUST00000180120 120 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm24570-201ENSMUST00000180314 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm24654-201ENSMUST00000180315 79 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm43626-201ENSMUST00000198575 162 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm44052-201ENSMUST00000203382 396 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 AC132384.11-201ENSMUST00000219676 178 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Gm25895-201ENSMUST00000083714 100 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim28Q62318 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.07□□□□□ -1.92
Trim28Q62318 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.07□□□□□ -1.92
Trim28Q62318 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim28Q62318 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Trim28Q62318 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Trim28Q62318 Gm13797-201ENSMUST00000121792 120 ntBASIC3.06□□□□□ -1.92
Trim28Q62318 Gm25393-201ENSMUST00000157336 285 ntBASIC3.06□□□□□ -1.92
Trim28Q62318 Gm22227-201ENSMUST00000157356 259 ntBASIC3.06□□□□□ -1.92
Trim28Q62318 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.06□□□□□ -1.92
Trim28Q62318 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Trim28Q62318 Gm25130-201ENSMUST00000082650 156 ntBASIC3.06□□□□□ -1.92
Trim28Q62318 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Trim28Q62318 AC125374.3-201ENSMUST00000214983 2810 ntBASIC3.06□□□□□ -1.92
Trim28Q62318 Mir344e-201ENSMUST00000104677 66 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Gm12954-201ENSMUST00000118610 611 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Gm25269-201ENSMUST00000122601 104 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.05□□□□□ -1.92
Trim28Q62318 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Gm43587-201ENSMUST00000199590 204 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Gm18617-201ENSMUST00000222311 259 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.05□□□□□ -1.92
Trim28Q62318 Gm25634-201ENSMUST00000082667 105 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms