Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mir3061-201ENSMUST00000175129 91 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Mir5104-201ENSMUST00000175319 94 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Mir8119-201ENSMUST00000183371 129 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm24152-201ENSMUST00000082764 163 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.85□□□□□ -2.27
Trav3-3Q5R1C3 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm12225-201ENSMUST00000117995 298 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm11522-201ENSMUST00000120533 176 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm25069-201ENSMUST00000175238 86 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm23419-201ENSMUST00000175523 84 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm20118-201ENSMUST00000187207 162 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm25820-202ENSMUST00000197479 128 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 AC155712.1-201ENSMUST00000219704 160 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm24356-201ENSMUST00000082859 106 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm25409-201ENSMUST00000083764 131 ntBASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav3-3Q5R1C3 Gm23951-201ENSMUST00000104029 132 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm15443-201ENSMUST00000118947 820 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm11792-201ENSMUST00000120640 168 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm23106-201ENSMUST00000157554 101 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm25884-201ENSMUST00000157782 62 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm24808-201ENSMUST00000157993 118 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm22425-201ENSMUST00000158532 138 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm24221-201ENSMUST00000158833 313 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm22403-201ENSMUST00000174919 84 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm24487-201ENSMUST00000178017 63 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm26652-202ENSMUST00000181672 475 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm42719-201ENSMUST00000197393 355 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm44408-201ENSMUST00000200205 66 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm24355-201ENSMUST00000082858 122 ntBASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Trav3-3Q5R1C3 Gm25805-201ENSMUST00000122788 108 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm22279-201ENSMUST00000157200 93 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm24076-201ENSMUST00000158179 94 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Cfap61-214ENSMUST00000167179 183 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm26180-201ENSMUST00000179942 107 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Mir7026-201ENSMUST00000184384 67 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm28992-201ENSMUST00000190534 139 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm45119-201ENSMUST00000207612 199 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm45704-201ENSMUST00000212582 403 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm18617-201ENSMUST00000222311 259 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm22306-201ENSMUST00000082692 107 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm25128-201ENSMUST00000083339 76 ntBASIC0.82□□□□□ -2.28
Trav3-3Q5R1C3 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm14922-201ENSMUST00000121131 163 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm12770-201ENSMUST00000121734 462 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm22551-201ENSMUST00000157795 103 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm20462-201ENSMUST00000172623 408 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm24020-201ENSMUST00000180156 108 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm27236-201ENSMUST00000184147 442 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Mir7225-201ENSMUST00000184178 54 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm37399-201ENSMUST00000195224 416 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm43602-201ENSMUST00000196772 300 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm42855-201ENSMUST00000197388 253 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm44960-201ENSMUST00000207403 141 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm33654-201ENSMUST00000221704 215 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm22685-201ENSMUST00000082848 106 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm24037-201ENSMUST00000082871 180 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Mir211-201ENSMUST00000083651 106 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm25513-201ENSMUST00000083861 162 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.81□□□□□ -2.28
Trav3-3Q5R1C3 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm11891-201ENSMUST00000121241 619 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm22199-201ENSMUST00000122660 126 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm24902-201ENSMUST00000158126 123 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm24393-201ENSMUST00000158135 97 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm22447-201ENSMUST00000158155 92 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm22664-201ENSMUST00000158719 105 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm27640-201ENSMUST00000184580 147 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm43220-201ENSMUST00000199299 282 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm44754-201ENSMUST00000208155 400 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm23299-201ENSMUST00000082708 79 ntBASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trav3-3Q5R1C3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Gm12512-201ENSMUST00000119620 217 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 Gm14782-201ENSMUST00000120151 195 ntBASIC0.79□□□□□ -2.28
Trav3-3Q5R1C3 n-R5s188-201ENSMUST00000122646 105 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms