Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm26401-201ENSMUST00000158502 76 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm22435-201ENSMUST00000158552 128 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm26435-201ENSMUST00000179026 107 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Mir7675-201ENSMUST00000184262 58 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23370-201ENSMUST00000199545 130 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm45704-201ENSMUST00000212582 403 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 AC167192.1-201ENSMUST00000225908 139 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Mir221-201ENSMUST00000083488 95 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24261-201ENSMUST00000083744 104 ntBASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.19□□□□□ -2.22
Trav8d-2Q5R1B6 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23705-201ENSMUST00000104370 130 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23718-201ENSMUST00000157350 307 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23390-201ENSMUST00000157393 106 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm25423-201ENSMUST00000157609 107 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24308-201ENSMUST00000177773 114 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm33866-201ENSMUST00000196911 289 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24625-201ENSMUST00000082622 130 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Mir211-201ENSMUST00000083651 106 ntBASIC1.18□□□□□ -2.22
Trav8d-2Q5R1B6 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24229-201ENSMUST00000158830 118 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm20462-201ENSMUST00000172623 408 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm22929-201ENSMUST00000175517 107 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24618-201ENSMUST00000177718 94 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23953-201ENSMUST00000178214 94 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23191-201ENSMUST00000179147 107 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm26332-201ENSMUST00000179813 94 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm22863-201ENSMUST00000180265 94 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm27793-201ENSMUST00000183405 76 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm28257-201ENSMUST00000185244 463 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm28912-201ENSMUST00000189001 234 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23140-201ENSMUST00000082487 107 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Mir10b-201ENSMUST00000083566 68 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm25409-201ENSMUST00000083764 131 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.17□□□□□ -2.22
Trav8d-2Q5R1B6 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm25759-201ENSMUST00000103988 129 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm25506-201ENSMUST00000104339 70 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23893-201ENSMUST00000158106 134 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24366-201ENSMUST00000175383 86 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm23660-201ENSMUST00000178362 79 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm24088-201ENSMUST00000179100 79 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm44010-201ENSMUST00000204432 331 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm5010-201ENSMUST00000213131 260 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.16□□□□□ -2.22
Trav8d-2Q5R1B6 Gm11359-201ENSMUST00000120039 567 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm13396-201ENSMUST00000120617 271 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm22113-201ENSMUST00000158343 104 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm29613-201ENSMUST00000185846 313 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm29661-201ENSMUST00000186781 315 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm29544-201ENSMUST00000188860 313 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm29308-201ENSMUST00000188863 315 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm28414-201ENSMUST00000190111 294 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm28808-201ENSMUST00000190978 313 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Gm37693-201ENSMUST00000194562 234 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.15□□□□□ -2.23
Trav8d-2Q5R1B6 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm22469-201ENSMUST00000104118 133 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm11835-201ENSMUST00000120635 663 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm24799-201ENSMUST00000178431 79 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm10092-201ENSMUST00000077110 180 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Snord14a-201ENSMUST00000082807 87 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm24356-201ENSMUST00000082859 106 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm26164-201ENSMUST00000083793 104 ntBASIC1.14□□□□□ -2.23
Trav8d-2Q5R1B6 Gm4746-201ENSMUST00000120395 2406 ntBASIC1.13□□□□□ -2.23
Trav8d-2Q5R1B6 Gm26500-201ENSMUST00000101867 106 ntBASIC1.13□□□□□ -2.23
Trav8d-2Q5R1B6 Gm11857-201ENSMUST00000119817 324 ntBASIC1.13□□□□□ -2.23
Trav8d-2Q5R1B6 Gm25909-201ENSMUST00000157619 121 ntBASIC1.13□□□□□ -2.23
Trav8d-2Q5R1B6 Snord13-201ENSMUST00000157627 104 ntBASIC1.13□□□□□ -2.23
Trav8d-2Q5R1B6 Gm24853-201ENSMUST00000158026 121 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 217.4 ms