Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.91□□□□□ -2.26
Upf3bQ3ULL6 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Upf3bQ3ULL6 Gm25207-201ENSMUST00000093745 107 ntBASIC0.91□□□□□ -2.26
Upf3bQ3ULL6 Gm14766-201ENSMUST00000121689 367 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm3027-201ENSMUST00000167579 451 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm18588-201ENSMUST00000177308 492 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm27640-201ENSMUST00000184580 147 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm42855-201ENSMUST00000197388 253 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm18696-201ENSMUST00000220103 274 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 AC116589.9-201ENSMUST00000221462 908 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Snord68-201ENSMUST00000082516 86 ntBASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Upf3bQ3ULL6 Mir701-201ENSMUST00000102208 109 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm23836-201ENSMUST00000104434 129 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm13967-201ENSMUST00000120404 380 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm22477-201ENSMUST00000122569 316 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm25663-201ENSMUST00000157698 135 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm23893-201ENSMUST00000158106 134 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm23340-201ENSMUST00000158955 123 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm22403-201ENSMUST00000174919 84 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm23515-201ENSMUST00000082829 107 ntBASIC0.89□□□□□ -2.27
Upf3bQ3ULL6 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Mir872-201ENSMUST00000104728 81 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm25507-201ENSMUST00000116981 144 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm27793-201ENSMUST00000183405 76 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm37399-201ENSMUST00000195224 416 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 AC192616.1-201ENSMUST00000221922 132 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm11351-202ENSMUST00000225724 478 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm24625-201ENSMUST00000082622 130 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm23448-201ENSMUST00000083151 104 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.88□□□□□ -2.27
Upf3bQ3ULL6 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Gm24005-201ENSMUST00000158459 296 ntBASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Gm24085-201ENSMUST00000175172 116 ntBASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Gm22565-201ENSMUST00000175540 69 ntBASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Gm5034-201ENSMUST00000199115 634 ntBASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Mir200b-201ENSMUST00000083615 70 ntBASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
Upf3bQ3ULL6 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm11407-201ENSMUST00000120362 1058 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm11254-201ENSMUST00000122368 653 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm22281-201ENSMUST00000157198 103 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm23106-201ENSMUST00000157554 101 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm25486-201ENSMUST00000158726 63 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm24221-201ENSMUST00000158833 313 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Mir6394-201ENSMUST00000184738 99 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm37801-201ENSMUST00000194754 274 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 Gm5001-201ENSMUST00000204361 331 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 AC164612.2-202ENSMUST00000216314 253 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 AC112972.1-201ENSMUST00000227329 365 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.86□□□□□ -2.27
Upf3bQ3ULL6 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm45557-201ENSMUST00000210004 1651 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm22935-201ENSMUST00000103960 104 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm24630-201ENSMUST00000122768 106 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm27271-201ENSMUST00000183509 170 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm27957-201ENSMUST00000184054 127 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm44301-201ENSMUST00000200362 143 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 AC100209.2-201ENSMUST00000224461 451 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 AC132918.1-201ENSMUST00000227877 925 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Gm9795-201ENSMUST00000062156 693 ntBASIC0.85□□□□□ -2.27
Upf3bQ3ULL6 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Gm14922-201ENSMUST00000121131 163 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Gm22279-201ENSMUST00000157200 93 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Gm28506-201ENSMUST00000189937 150 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 AC144733.1-201ENSMUST00000222893 1289 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Mir344-201ENSMUST00000083634 95 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
Upf3bQ3ULL6 Gm13729-201ENSMUST00000120328 406 ntBASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Gm23435-201ENSMUST00000157183 156 ntBASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Gm24308-201ENSMUST00000177773 114 ntBASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Gm26200-201ENSMUST00000180273 79 ntBASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Upf3bQ3ULL6 Gm25851-201ENSMUST00000082794 107 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms