Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm24316-201ENSMUST00000083041 107 ntBASIC1.65□□□□□ -2.15
Trafd1Q3UDK1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Gm12837-201ENSMUST00000120131 373 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Mir1291-201ENSMUST00000199842 117 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Gm42807-201ENSMUST00000200141 329 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Gm24356-201ENSMUST00000082859 106 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Snora34-201ENSMUST00000083402 138 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Gm24764-201ENSMUST00000083686 199 ntBASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trafd1Q3UDK1 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm15526-201ENSMUST00000112504 204 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm13714-201ENSMUST00000117313 221 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm15067-201ENSMUST00000119534 156 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm25279-201ENSMUST00000122608 133 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 U6.1-201ENSMUST00000157443 101 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm22814-201ENSMUST00000157452 104 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm23579-201ENSMUST00000158528 103 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm26157-201ENSMUST00000158974 126 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Mir28b-201ENSMUST00000175399 80 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm25450-201ENSMUST00000179144 107 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm17067-202ENSMUST00000180131 123 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm27511-201ENSMUST00000183502 127 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm27878-201ENSMUST00000184000 106 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm29665-201ENSMUST00000191457 528 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Mir7227-201ENSMUST00000200408 59 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm20144-201ENSMUST00000203031 165 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm44564-201ENSMUST00000207985 180 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm24355-201ENSMUST00000082858 122 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.63□□□□□ -2.15
Trafd1Q3UDK1 Gm15102-201ENSMUST00000118740 1502 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm11794-201ENSMUST00000119446 237 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm22215-201ENSMUST00000157558 96 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm23858-201ENSMUST00000158384 106 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Mir1936-201ENSMUST00000158699 93 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm28058-201ENSMUST00000186421 264 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 AC163033.1-201ENSMUST00000218608 157 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm24406-201ENSMUST00000083026 128 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Gm23845-201ENSMUST00000083834 152 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.62□□□□□ -2.15
Trafd1Q3UDK1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm13725-201ENSMUST00000122139 207 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm24837-201ENSMUST00000158683 81 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm27997-201ENSMUST00000184942 69 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm28383-201ENSMUST00000187563 139 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm18357-201ENSMUST00000188184 580 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm29262-201ENSMUST00000190084 196 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm11351-202ENSMUST00000225724 478 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm25788-201ENSMUST00000082721 131 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.61□□□□□ -2.15
Trafd1Q3UDK1 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm23941-201ENSMUST00000101953 107 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm23759-201ENSMUST00000158351 268 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm24174-201ENSMUST00000158933 111 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm22448-201ENSMUST00000179254 107 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm44308-201ENSMUST00000197080 99 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm42594-201ENSMUST00000199511 246 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Mir107-201ENSMUST00000083660 87 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Gm26175-201ENSMUST00000083794 131 ntBASIC1.6□□□□□ -2.15
Trafd1Q3UDK1 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm11862-201ENSMUST00000119678 659 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm23983-201ENSMUST00000157142 114 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm26181-201ENSMUST00000157687 106 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm22101-201ENSMUST00000157928 103 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm20438-201ENSMUST00000174441 329 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm44655-201ENSMUST00000207768 423 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 AC163295.1-201ENSMUST00000227840 314 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm24460-201ENSMUST00000082731 106 ntBASIC1.59□□□□□ -2.15
Trafd1Q3UDK1 Gm23055-201ENSMUST00000082805 94 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms