Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gm6829-201ENSMUST00000119858 360 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Gm22556-201ENSMUST00000157803 100 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Gm27753-201ENSMUST00000184742 203 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Gm28647-201ENSMUST00000188416 197 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Gm44024-201ENSMUST00000203008 476 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Gm45778-201ENSMUST00000211959 153 ntBASIC3.09□□□□□ -1.91
Rnf180Q3U827 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Rnf180Q3U827 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Rnf180Q3U827 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Mir758-201ENSMUST00000103260 81 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm23492-201ENSMUST00000116837 115 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm11786-201ENSMUST00000120799 155 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 n-R5s159-201ENSMUST00000122681 120 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm25020-201ENSMUST00000178071 107 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm43991-201ENSMUST00000203751 274 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm18991-201ENSMUST00000209225 746 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm23040-201ENSMUST00000083869 163 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.08□□□□□ -1.92
Rnf180Q3U827 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Rnf180Q3U827 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Rnf180Q3U827 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Rnf180Q3U827 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Rnf180Q3U827 Gm15365-201ENSMUST00000122392 300 ntBASIC3.07□□□□□ -1.92
Rnf180Q3U827 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.07□□□□□ -1.92
Rnf180Q3U827 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.07□□□□□ -1.92
Rnf180Q3U827 Mir1967-201ENSMUST00000157789 82 ntBASIC3.07□□□□□ -1.92
Rnf180Q3U827 Gm19901-201ENSMUST00000192191 495 ntBASIC3.07□□□□□ -1.92
Rnf180Q3U827 Gm44425-201ENSMUST00000203739 429 ntBASIC3.07□□□□□ -1.92
Rnf180Q3U827 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.07□□□□□ -1.92
Rnf180Q3U827 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Rnf180Q3U827 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Rnf180Q3U827 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Rnf180Q3U827 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Rnf180Q3U827 Gm22217-201ENSMUST00000157556 313 ntBASIC3.06□□□□□ -1.92
Rnf180Q3U827 Gm22348-201ENSMUST00000178674 79 ntBASIC3.06□□□□□ -1.92
Rnf180Q3U827 AL928567.1-201ENSMUST00000197891 138 ntBASIC3.06□□□□□ -1.92
Rnf180Q3U827 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Rnf180Q3U827 Gm44563-201ENSMUST00000207958 178 ntBASIC3.06□□□□□ -1.92
Rnf180Q3U827 Gm6030-201ENSMUST00000078768 402 ntBASIC3.06□□□□□ -1.92
Rnf180Q3U827 Gm25789-201ENSMUST00000083294 76 ntBASIC3.06□□□□□ -1.92
Rnf180Q3U827 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 Gm27793-201ENSMUST00000183405 76 ntBASIC3.05□□□□□ -1.92
Rnf180Q3U827 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.05□□□□□ -1.92
Rnf180Q3U827 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.05□□□□□ -1.92
Rnf180Q3U827 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.05□□□□□ -1.92
Rnf180Q3U827 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.05□□□□□ -1.92
Rnf180Q3U827 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.05□□□□□ -1.92
Rnf180Q3U827 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Rnf180Q3U827 Mir767-201ENSMUST00000103256 107 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm9009-201ENSMUST00000117321 326 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm12926-201ENSMUST00000121158 409 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm23536-201ENSMUST00000157541 134 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm27928-201ENSMUST00000183747 256 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm43993-201ENSMUST00000203972 247 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm25199-201ENSMUST00000083095 104 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm26265-201ENSMUST00000083277 135 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.04□□□□□ -1.92
Rnf180Q3U827 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Gm6954-201ENSMUST00000117416 225 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Mir3106-201ENSMUST00000175401 82 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Gm22800-201ENSMUST00000175627 94 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Gm23190-201ENSMUST00000180307 64 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Gm27465-201ENSMUST00000184290 91 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Rnf180Q3U827 Snord82-201ENSMUST00000082889 70 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Gm23678-201ENSMUST00000083157 107 ntBASIC3.03□□□□□ -1.92
Rnf180Q3U827 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Rnf180Q3U827 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
Rnf180Q3U827 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Rnf180Q3U827 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.03□□□□□ -1.92
Rnf180Q3U827 Gm16032-201ENSMUST00000118534 168 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 Gm25059-201ENSMUST00000157367 117 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 Gm24771-201ENSMUST00000158508 137 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 Mir669n-201ENSMUST00000158636 54 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 Gm25589-201ENSMUST00000082502 166 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 Gm10360-201ENSMUST00000097219 272 ntBASIC3.02□□□□□ -1.93
Rnf180Q3U827 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Rnf180Q3U827 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Rnf180Q3U827 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Rnf180Q3U827 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.01□□□□□ -1.93
Rnf180Q3U827 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.01□□□□□ -1.93
Rnf180Q3U827 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 150.4 ms