Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm23492-201ENSMUST00000116837 115 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm13913-201ENSMUST00000121126 260 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm16404-201ENSMUST00000177739 468 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm23922-201ENSMUST00000178792 79 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm24657-201ENSMUST00000180085 79 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm14598-201ENSMUST00000180109 468 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm14625-201ENSMUST00000180231 468 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm22996-201ENSMUST00000180236 79 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm27645-201ENSMUST00000183348 77 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm6003-201ENSMUST00000187903 463 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm43563-201ENSMUST00000196761 198 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Mir378a-201ENSMUST00000198300 66 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 Gm18000-201ENSMUST00000212153 800 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 AC132615.1-201ENSMUST00000213873 255 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 CU062626.2-201ENSMUST00000223953 274 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.39□□□□□ -2.03
Col28a1Q2UY11 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm13797-201ENSMUST00000121792 120 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm22947-201ENSMUST00000158559 91 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm24053-201ENSMUST00000158620 105 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm16289-201ENSMUST00000162079 183 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Mir3069-201ENSMUST00000198802 65 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm44524-201ENSMUST00000203899 271 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm24148-201ENSMUST00000082762 80 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Gm26327-201ENSMUST00000093724 111 ntBASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col28a1Q2UY11 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Mir682-201ENSMUST00000102281 96 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm15183-201ENSMUST00000118933 348 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm15497-201ENSMUST00000119137 551 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm22227-201ENSMUST00000157356 259 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm23033-201ENSMUST00000157996 134 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm16162-201ENSMUST00000162296 297 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm22699-201ENSMUST00000175376 105 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Mir6370-201ENSMUST00000183510 120 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm29005-201ENSMUST00000186773 320 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm25204-201ENSMUST00000082843 106 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm22622-201ENSMUST00000082870 129 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Snora19-201ENSMUST00000082962 132 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm23658-201ENSMUST00000083233 132 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Gm23138-201ENSMUST00000083365 103 ntBASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Col28a1Q2UY11 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col28a1Q2UY11 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm22560-201ENSMUST00000157332 120 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Mir1927-201ENSMUST00000158579 109 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm44182-201ENSMUST00000204052 115 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm25814-201ENSMUST00000082754 107 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm24355-201ENSMUST00000082858 122 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm23722-201ENSMUST00000083002 130 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm25628-201ENSMUST00000084002 105 ntBASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col28a1Q2UY11 Gm11460-201ENSMUST00000118200 361 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm26099-201ENSMUST00000157248 109 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm26022-201ENSMUST00000158663 108 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Mir1966-201ENSMUST00000158807 108 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm44476-201ENSMUST00000196225 91 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm44352-201ENSMUST00000196358 110 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm25634-201ENSMUST00000082667 105 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm24705-201ENSMUST00000082808 107 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Mir137-201ENSMUST00000083635 73 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm24698-201ENSMUST00000083883 130 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Col28a1Q2UY11 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm27047-201ENSMUST00000183072 1819 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm25526-201ENSMUST00000104332 132 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm23651-201ENSMUST00000116755 120 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm13862-201ENSMUST00000121220 197 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm23589-201ENSMUST00000157660 105 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm24212-201ENSMUST00000158258 132 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm17113-201ENSMUST00000170118 171 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm25476-201ENSMUST00000175125 185 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm3852-201ENSMUST00000182781 264 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm28344-201ENSMUST00000185704 279 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm18617-201ENSMUST00000222311 259 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm22443-201ENSMUST00000082890 107 ntBASIC2.34□□□□□ -2.03
Col28a1Q2UY11 Gm23727-201ENSMUST00000083352 164 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms