Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm22429-201ENSMUST00000158553 130 ntBASIC3.72□□□□□ -1.81
Col17a1Q07563 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.72□□□□□ -1.81
Col17a1Q07563 Gm7726-201ENSMUST00000206241 231 ntBASIC3.72□□□□□ -1.81
Col17a1Q07563 Mir384-201ENSMUST00000083565 88 ntBASIC3.72□□□□□ -1.81
Col17a1Q07563 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Col17a1Q07563 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
Col17a1Q07563 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm14922-201ENSMUST00000121131 163 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm16354-201ENSMUST00000155376 150 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm24916-201ENSMUST00000157287 79 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm23260-201ENSMUST00000158317 172 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm22775-201ENSMUST00000177630 120 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm24926-201ENSMUST00000178053 79 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm22632-201ENSMUST00000178266 79 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm23569-201ENSMUST00000180120 120 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm24204-201ENSMUST00000082950 107 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.71□□□□□ -1.82
Col17a1Q07563 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Col17a1Q07563 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm23183-201ENSMUST00000122595 323 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm22447-201ENSMUST00000158155 92 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm22139-201ENSMUST00000158747 105 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.7□□□□□ -1.82
Col17a1Q07563 Ighv1-32-201ENSMUST00000195149 351 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm23455-201ENSMUST00000083331 100 ntBASIC3.7□□□□□ -1.82
Col17a1Q07563 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Col17a1Q07563 Gm26082-201ENSMUST00000104070 127 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm11429-201ENSMUST00000119089 144 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 n-R5s164-201ENSMUST00000122664 112 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm25494-201ENSMUST00000158143 100 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm25470-201ENSMUST00000175576 111 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm27326-201ENSMUST00000183504 95 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm42988-201ENSMUST00000198116 225 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm26457-201ENSMUST00000082678 78 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Gm24762-201ENSMUST00000083689 104 ntBASIC3.69□□□□□ -1.82
Col17a1Q07563 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col17a1Q07563 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Col17a1Q07563 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Col17a1Q07563 Mir669b-201ENSMUST00000102172 97 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm12191-201ENSMUST00000118307 348 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm9703-201ENSMUST00000119573 343 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm12640-201ENSMUST00000120097 310 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm25162-201ENSMUST00000158906 159 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm24666-201ENSMUST00000158937 167 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm28794-201ENSMUST00000185276 136 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.68□□□□□ -1.82
Col17a1Q07563 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.68□□□□□ -1.82
Col17a1Q07563 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Col17a1Q07563 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm24010-201ENSMUST00000157731 282 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm24771-201ENSMUST00000158508 137 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm3851-201ENSMUST00000168653 318 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm3852-201ENSMUST00000182781 264 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm27271-201ENSMUST00000183509 170 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Mir6394-201ENSMUST00000184738 99 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm43239-201ENSMUST00000200131 201 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm44425-201ENSMUST00000203739 429 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm22061-201ENSMUST00000082557 107 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm24449-201ENSMUST00000083985 106 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.67□□□□□ -1.82
Col17a1Q07563 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm43373-201ENSMUST00000202552 2870 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm26080-201ENSMUST00000104069 131 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm24054-201ENSMUST00000158619 105 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm17100-201ENSMUST00000168963 272 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Mir21b-201ENSMUST00000184317 108 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Mir6405-201ENSMUST00000184584 124 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Mir465d-201ENSMUST00000196314 58 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm43978-201ENSMUST00000203491 451 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 CT033781.2-201ENSMUST00000221113 153 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 AC115735.1-201ENSMUST00000226633 350 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm22509-201ENSMUST00000082775 107 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 Gm10360-201ENSMUST00000097219 272 ntBASIC3.67□□□□□ -1.82
Col17a1Q07563 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm24116-201ENSMUST00000103975 107 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm22071-201ENSMUST00000116857 83 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm24288-201ENSMUST00000157630 144 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm26403-201ENSMUST00000158500 105 ntBASIC3.66□□□□□ -1.82
Col17a1Q07563 Gm23409-201ENSMUST00000158516 237 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 250.4 ms