Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm22586-201ENSMUST00000157507 122 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm24717-201ENSMUST00000157522 124 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm22213-201ENSMUST00000157564 119 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm23644-201ENSMUST00000157856 77 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm25464-201ENSMUST00000175481 107 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Mir6402-201ENSMUST00000183406 80 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 AC161758.2-201ENSMUST00000228513 218 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Col6a1Q04857 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a1Q04857 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.39□□□□□ -1.87
Col6a1Q04857 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Col6a1Q04857 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a1Q04857 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Col6a1Q04857 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col6a1Q04857 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Col6a1Q04857 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Col6a1Q04857 Gm22782-201ENSMUST00000104082 132 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Gm26423-201ENSMUST00000104277 128 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Gm23559-201ENSMUST00000157824 103 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Mir1951-201ENSMUST00000157981 89 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Gm26405-201ENSMUST00000158495 100 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Mir1936-201ENSMUST00000158699 93 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Gm38298-201ENSMUST00000193578 118 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Snora2b-201ENSMUST00000084005 137 ntBASIC3.38□□□□□ -1.87
Col6a1Q04857 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Col6a1Q04857 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Col6a1Q04857 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col6a1Q04857 Gm22141-201ENSMUST00000157403 277 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col6a1Q04857 Gm43901-201ENSMUST00000203247 453 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 Mir186-201ENSMUST00000083497 71 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col6a1Q04857 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col6a1Q04857 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Col6a1Q04857 AC159625.1-201ENSMUST00000220994 2625 ntBASIC3.37□□□□□ -1.87
Col6a1Q04857 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Mir878-201ENSMUST00000104680 78 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm22850-201ENSMUST00000157714 82 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm26160-201ENSMUST00000158965 63 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm7258-201ENSMUST00000179317 300 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm27582-201ENSMUST00000184084 126 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm28002-201ENSMUST00000184832 100 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm37116-201ENSMUST00000195161 147 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.36□□□□□ -1.87
Col6a1Q04857 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a1Q04857 Gm24232-201ENSMUST00000104314 132 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm23772-201ENSMUST00000104433 102 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm24878-201ENSMUST00000158782 104 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm23194-201ENSMUST00000158813 105 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm23933-201ENSMUST00000178405 79 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm20058-201ENSMUST00000186939 284 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm44476-201ENSMUST00000196225 91 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 AC120540.2-201ENSMUST00000221716 387 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm22686-201ENSMUST00000082847 100 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Gm23136-201ENSMUST00000083425 99 ntBASIC3.35□□□□□ -1.87
Col6a1Q04857 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a1Q04857 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a1Q04857 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm22105-201ENSMUST00000116734 116 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm25625-201ENSMUST00000157221 96 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm26099-201ENSMUST00000157248 109 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm23535-201ENSMUST00000157542 106 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm23895-201ENSMUST00000158108 160 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm23182-201ENSMUST00000158688 135 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm24816-201ENSMUST00000175311 151 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm26061-201ENSMUST00000175584 108 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm29613-201ENSMUST00000185846 313 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm29544-201ENSMUST00000188860 313 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm28808-201ENSMUST00000190978 313 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm9251-201ENSMUST00000197202 628 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a1Q04857 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm23911-201ENSMUST00000104596 134 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm24916-201ENSMUST00000157287 79 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm24908-201ENSMUST00000157294 127 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm26360-201ENSMUST00000158872 103 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm22500-201ENSMUST00000158982 99 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm29602-201ENSMUST00000186887 442 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm43676-201ENSMUST00000197532 540 ntBASIC3.33□□□□□ -1.88
Col6a1Q04857 Gm43587-201ENSMUST00000199590 204 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms