Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm28848-201ENSMUST00000189984 168 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm37693-201ENSMUST00000194562 234 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm44811-201ENSMUST00000209120 228 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 AC162857.1-201ENSMUST00000226614 400 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm23614-201ENSMUST00000082598 107 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm24977-201ENSMUST00000083106 163 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm24615-201ENSMUST00000083268 113 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Gm22972-201ENSMUST00000083297 131 ntBASIC0.87□□□□□ -2.27
Nkx3-1P97436 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm26339-201ENSMUST00000102368 99 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm9059-201ENSMUST00000118319 183 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm11512-201ENSMUST00000119669 663 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm14937-201ENSMUST00000119709 208 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm14782-201ENSMUST00000120151 195 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm14287-201ENSMUST00000121060 117 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm24851-201ENSMUST00000158028 103 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Rnu7-201ENSMUST00000158458 62 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm24005-201ENSMUST00000158459 296 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm26213-201ENSMUST00000158582 110 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm17100-201ENSMUST00000168963 272 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm28414-201ENSMUST00000190111 294 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.86□□□□□ -2.27
Nkx3-1P97436 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm44490-201ENSMUST00000198566 127 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm23370-201ENSMUST00000199545 130 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm5899-201ENSMUST00000071770 270 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm22685-201ENSMUST00000082848 106 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Mir200b-201ENSMUST00000083615 70 ntBASIC0.86□□□□□ -2.27
Nkx3-1P97436 Gm25496-201ENSMUST00000104430 120 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Nkx3-1P97436 Mir1b-201ENSMUST00000117012 122 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm13396-201ENSMUST00000120617 271 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm24598-201ENSMUST00000122510 74 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm23656-201ENSMUST00000122626 112 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm23120-201ENSMUST00000157654 287 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm24229-201ENSMUST00000158830 118 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Nkx3-1P97436 Mir6540-201ENSMUST00000184886 108 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm28257-201ENSMUST00000185244 463 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm29037-201ENSMUST00000189092 313 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm44491-201ENSMUST00000196794 96 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.85□□□□□ -2.27
Nkx3-1P97436 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm5010-201ENSMUST00000213131 260 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm7495-201ENSMUST00000215099 426 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Nkx3-1P97436 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm46997-201ENSMUST00000222108 217 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Nkx3-1P97436 Gm3867-201ENSMUST00000086108 279 ntBASIC0.85□□□□□ -2.27
Nkx3-1P97436 Mir872-201ENSMUST00000104728 81 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm24915-201ENSMUST00000157288 78 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm22221-201ENSMUST00000157362 103 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm26150-201ENSMUST00000157426 151 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm22555-201ENSMUST00000157801 62 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm24499-201ENSMUST00000158446 104 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm26401-201ENSMUST00000158502 76 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm24366-201ENSMUST00000175383 86 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm24487-201ENSMUST00000178017 63 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm26435-201ENSMUST00000179026 107 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm22510-201ENSMUST00000179304 79 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm26336-201ENSMUST00000179449 79 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm26390-201ENSMUST00000179628 79 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm25121-201ENSMUST00000179846 79 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm22263-201ENSMUST00000180060 104 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm9156-201ENSMUST00000189660 463 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC0.84□□□□□ -2.27
Nkx3-1P97436 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm25079-201ENSMUST00000082529 203 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Gm24536-201ENSMUST00000083144 107 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Mir10b-201ENSMUST00000083566 68 ntBASIC0.84□□□□□ -2.27
Nkx3-1P97436 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
Nkx3-1P97436 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm12417-201ENSMUST00000119153 403 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm12433-201ENSMUST00000119659 255 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm11835-201ENSMUST00000120635 663 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm25371-201ENSMUST00000158162 101 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm2962-201ENSMUST00000159266 336 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm23660-201ENSMUST00000178362 79 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm24088-201ENSMUST00000179100 79 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm27271-201ENSMUST00000183509 170 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm37801-201ENSMUST00000194754 274 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm24355-201ENSMUST00000082858 122 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Snord118-201ENSMUST00000082965 135 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Gm26066-201ENSMUST00000083385 109 ntBASIC0.83□□□□□ -2.28
Nkx3-1P97436 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm23991-201ENSMUST00000117033 93 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm22027-201ENSMUST00000122737 127 ntBASIC0.82□□□□□ -2.28
Nkx3-1P97436 Gm25909-201ENSMUST00000157619 121 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms