Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm28383-201ENSMUST00000187563 139 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm29262-201ENSMUST00000190084 196 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm26265-202ENSMUST00000196326 133 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm43238-201ENSMUST00000196463 359 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm43578-201ENSMUST00000201250 459 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm43993-201ENSMUST00000203972 247 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm44654-201ENSMUST00000208052 329 ntBASIC1.45□□□□□ -2.18
Sox3P53784 AC109212.1-201ENSMUST00000215561 427 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm24152-201ENSMUST00000082764 163 ntBASIC1.45□□□□□ -2.18
Sox3P53784 Gm13714-201ENSMUST00000117313 221 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.44□□□□□ -2.18
Sox3P53784 Gm22447-201ENSMUST00000158155 92 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm23854-201ENSMUST00000158378 108 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm24222-201ENSMUST00000158834 93 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm17067-202ENSMUST00000180131 123 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm38109-201ENSMUST00000195386 181 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm44384-201ENSMUST00000200208 114 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Sox3P53784 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC173345.2-201ENSMUST00000222795 153 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC183092.1-201ENSMUST00000224301 153 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm23242-201ENSMUST00000083055 107 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Mir496a-201ENSMUST00000093627 79 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm10360-201ENSMUST00000097219 272 ntBASIC1.44□□□□□ -2.18
Sox3P53784 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.44□□□□□ -2.18
Sox3P53784 AC102369.2-201ENSMUST00000219725 1679 ntBASIC1.44□□□□□ -2.18
Sox3P53784 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Sox3P53784 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm11420-201ENSMUST00000120047 402 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm24632-201ENSMUST00000122770 323 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm25333-201ENSMUST00000158035 246 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm26405-201ENSMUST00000158495 100 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm23181-201ENSMUST00000158685 110 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Mir1936-201ENSMUST00000158699 93 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Mir6419-201ENSMUST00000184784 113 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.43□□□□□ -2.18
Sox3P53784 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Sox3P53784 Gm34783-201ENSMUST00000209159 303 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm45456-201ENSMUST00000210841 243 ntBASIC1.43□□□□□ -2.18
Sox3P53784 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.43□□□□□ -2.18
Sox3P53784 AC155712.1-201ENSMUST00000219704 160 ntBASIC1.43□□□□□ -2.18
Sox3P53784 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Gm25929-201ENSMUST00000082784 107 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Mir133a-1-201ENSMUST00000083465 68 ntBASIC1.43□□□□□ -2.18
Sox3P53784 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Sox3P53784 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Sox3P53784 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Sox3P53784 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Sox3P53784 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Sox3P53784 Mir873a-201ENSMUST00000104863 77 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm6025-201ENSMUST00000121517 201 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm23390-201ENSMUST00000157393 106 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm25914-201ENSMUST00000157618 153 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm25491-201ENSMUST00000158733 308 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Mir3057-201ENSMUST00000175040 91 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm25035-201ENSMUST00000175414 77 ntBASIC1.42□□□□□ -2.18
Sox3P53784 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Sox3P53784 Gm24618-201ENSMUST00000177718 94 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm23953-201ENSMUST00000178214 94 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm26332-201ENSMUST00000179813 94 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm22863-201ENSMUST00000180265 94 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Mir6388-201ENSMUST00000184417 75 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm42834-201ENSMUST00000196845 256 ntBASIC1.42□□□□□ -2.18
Sox3P53784 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Snord118-201ENSMUST00000082965 135 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm24615-201ENSMUST00000083268 113 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Gm25578-201ENSMUST00000083406 104 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Mir340-201ENSMUST00000083483 98 ntBASIC1.42□□□□□ -2.18
Sox3P53784 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm25787-201ENSMUST00000104709 92 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm11854-201ENSMUST00000117839 446 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm11859-201ENSMUST00000118099 455 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm14574-201ENSMUST00000120644 279 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm24895-201ENSMUST00000122742 74 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm16162-201ENSMUST00000162296 297 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-7-201ENSMUST00000180364 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Gm37399-201ENSMUST00000195224 416 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-6-201ENSMUST00000196127 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-12-201ENSMUST00000197274 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-5-201ENSMUST00000197439 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-10-201ENSMUST00000197745 87 ntBASIC1.41□□□□□ -2.18
Sox3P53784 Mir669a-11-201ENSMUST00000197952 87 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms