Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm22270-201ENSMUST00000104034 132 ntBASIC3.28□□□□□ -1.88
Sox1P53783 Gm26247-201ENSMUST00000116702 91 ntBASIC3.28□□□□□ -1.88
Sox1P53783 Gm25280-201ENSMUST00000157269 101 ntBASIC3.28□□□□□ -1.88
Sox1P53783 Gm23718-201ENSMUST00000157350 307 ntBASIC3.28□□□□□ -1.88
Sox1P53783 Gm18546-201ENSMUST00000197245 676 ntBASIC3.28□□□□□ -1.88
Sox1P53783 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.28□□□□□ -1.88
Sox1P53783 Gm43877-201ENSMUST00000205029 2238 ntBASIC3.28□□□□□ -1.88
Sox1P53783 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sox1P53783 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sox1P53783 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sox1P53783 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sox1P53783 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.27□□□□□ -1.89
Sox1P53783 Gm23256-201ENSMUST00000102235 110 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Gm24274-201ENSMUST00000116787 124 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Gm24922-201ENSMUST00000158511 102 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Gm24277-201ENSMUST00000158661 104 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Gm26061-201ENSMUST00000175584 108 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Mir3569-201ENSMUST00000185080 58 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.27□□□□□ -1.89
Sox1P53783 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.27□□□□□ -1.89
Sox1P53783 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.27□□□□□ -1.89
Sox1P53783 AC126672.1-201ENSMUST00000217096 396 ntBASIC3.27□□□□□ -1.89
Sox1P53783 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.27□□□□□ -1.89
Sox1P53783 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sox1P53783 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Sox1P53783 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sox1P53783 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sox1P53783 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sox1P53783 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm22105-201ENSMUST00000116734 116 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm22678-201ENSMUST00000116974 101 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm11285-201ENSMUST00000118443 322 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm13560-201ENSMUST00000121865 329 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm24595-201ENSMUST00000122501 110 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm24896-201ENSMUST00000122741 135 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.26□□□□□ -1.89
Sox1P53783 Gm24443-201ENSMUST00000157242 132 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm23644-201ENSMUST00000157856 77 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm22612-201ENSMUST00000158293 101 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Mir6386-201ENSMUST00000183558 104 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.26□□□□□ -1.89
Sox1P53783 Gm37281-201ENSMUST00000192412 439 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm43901-201ENSMUST00000203247 453 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Gm5358-201ENSMUST00000212814 353 ntBASIC3.26□□□□□ -1.89
Sox1P53783 AC154552.7-201ENSMUST00000222824 156 ntBASIC3.26□□□□□ -1.89
Sox1P53783 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.26□□□□□ -1.89
Sox1P53783 Gm10242-201ENSMUST00000090064 330 ntBASIC3.26□□□□□ -1.89
Sox1P53783 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sox1P53783 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.26□□□□□ -1.89
Sox1P53783 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Sox1P53783 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Sox1P53783 AC157570.1-201ENSMUST00000218052 3778 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Sox1P53783 Gm26387-201ENSMUST00000104238 132 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.25□□□□□ -1.89
Sox1P53783 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.25□□□□□ -1.89
Sox1P53783 Snord92-201ENSMUST00000175548 85 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Sox1P53783 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Gm24977-201ENSMUST00000083106 163 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Gm23040-201ENSMUST00000083869 163 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Gm37063-201ENSMUST00000194678 3520 ntBASIC3.25□□□□□ -1.89
Sox1P53783 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Sox1P53783 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.25□□□□□ -1.89
Sox1P53783 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Sox1P53783 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Sox1P53783 Gm25153-201ENSMUST00000157118 156 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Sox1P53783 Gm38364-201ENSMUST00000191814 179 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Gm45452-201ENSMUST00000210905 177 ntBASIC3.24□□□□□ -1.89
Sox1P53783 mt-Tf-201ENSMUST00000082387 68 ntBASIC3.24□□□□□ -1.89
Sox1P53783 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.24□□□□□ -1.89
Sox1P53783 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.24□□□□□ -1.89
Sox1P53783 Gm23951-201ENSMUST00000104029 132 ntBASIC3.23□□□□□ -1.89
Sox1P53783 Gm20613-201ENSMUST00000175828 345 ntBASIC3.23□□□□□ -1.89
Sox1P53783 Mir6715-201ENSMUST00000184990 57 ntBASIC3.23□□□□□ -1.89
Sox1P53783 Gm43899-201ENSMUST00000203675 246 ntBASIC3.23□□□□□ -1.89
Sox1P53783 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.23□□□□□ -1.89
Sox1P53783 Gm22304-201ENSMUST00000082688 129 ntBASIC3.23□□□□□ -1.89
Sox1P53783 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.23□□□□□ -1.89
Sox1P53783 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Sox1P53783 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Sox1P53783 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Sox1P53783 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Sox1P53783 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Sox1P53783 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.22□□□□□ -1.89
Sox1P53783 Gm23048-201ENSMUST00000157237 129 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm23665-201ENSMUST00000158054 62 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm23257-201ENSMUST00000158322 132 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm22532-201ENSMUST00000158822 140 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm29604-201ENSMUST00000187176 163 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Gm44024-201ENSMUST00000203008 476 ntBASIC3.22□□□□□ -1.89
Sox1P53783 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Sox1P53783 Gm23303-201ENSMUST00000082714 152 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms