Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm24605-201ENSMUST00000104772 96 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm14846-201ENSMUST00000121868 216 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm25920-201ENSMUST00000158307 99 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm23759-201ENSMUST00000158351 268 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm17020-201ENSMUST00000172274 274 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm29604-201ENSMUST00000187176 163 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm36946-201ENSMUST00000192706 435 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm37624-201ENSMUST00000193751 219 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm24044-201ENSMUST00000083107 156 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm24410-201ENSMUST00000083433 107 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nkx2-1P50220 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Nkx2-1P50220 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.87□□□□□ -2.11
Nkx2-1P50220 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Nkx2-1P50220 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm24867-201ENSMUST00000104161 107 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm26247-201ENSMUST00000116702 91 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm25059-201ENSMUST00000157367 117 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm25066-201ENSMUST00000158145 123 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm22113-201ENSMUST00000158343 104 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm7592-201ENSMUST00000160674 627 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Mir28b-201ENSMUST00000175399 80 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm27476-201ENSMUST00000183366 104 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm27878-201ENSMUST00000184000 106 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm29022-201ENSMUST00000190702 225 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm28288-201ENSMUST00000191019 214 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm45296-201ENSMUST00000209625 205 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm6796-201ENSMUST00000211919 243 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm45907-201ENSMUST00000213023 193 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.86□□□□□ -2.11
Nkx2-1P50220 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nkx2-1P50220 Gm24423-201ENSMUST00000101982 106 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm24121-201ENSMUST00000102029 106 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Mir344c-201ENSMUST00000103919 92 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm23990-201ENSMUST00000117031 117 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm13756-201ENSMUST00000117618 222 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm13432-201ENSMUST00000118861 241 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm23640-201ENSMUST00000157860 104 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm26287-201ENSMUST00000158887 81 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm24106-201ENSMUST00000175498 127 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Mir6399-201ENSMUST00000184050 84 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm3724-201ENSMUST00000197957 349 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm7214-201ENSMUST00000222428 272 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm24762-201ENSMUST00000083689 104 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm26314-201ENSMUST00000083891 107 ntBASIC1.85□□□□□ -2.11
Nkx2-1P50220 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Nkx2-1P50220 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.84□□□□□ -2.11
Nkx2-1P50220 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm6897-201ENSMUST00000117714 138 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm14758-201ENSMUST00000119104 138 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm14782-201ENSMUST00000120151 195 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm24598-201ENSMUST00000122510 74 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm25543-201ENSMUST00000122678 312 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm22517-201ENSMUST00000158265 136 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm24922-201ENSMUST00000158511 102 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm25368-201ENSMUST00000158847 131 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm23005-201ENSMUST00000158950 136 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm25473-201ENSMUST00000180191 107 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm27645-201ENSMUST00000183348 77 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Mir6993-201ENSMUST00000184912 65 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm44482-201ENSMUST00000199232 103 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm44977-201ENSMUST00000205283 420 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm44922-201ENSMUST00000206690 90 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm45386-201ENSMUST00000210194 218 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm24977-201ENSMUST00000083106 163 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Gm24817-201ENSMUST00000093672 105 ntBASIC1.84□□□□□ -2.11
Nkx2-1P50220 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
Nkx2-1P50220 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm26479-201ENSMUST00000122620 106 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm24896-201ENSMUST00000122741 135 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm23232-201ENSMUST00000157300 105 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm25015-201ENSMUST00000158400 128 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm25834-201ENSMUST00000158916 101 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm23355-201ENSMUST00000177614 107 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm22450-201ENSMUST00000179641 107 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm23148-201ENSMUST00000180367 107 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Mir6916-201ENSMUST00000184514 63 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm27540-201ENSMUST00000184950 187 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm37089-201ENSMUST00000195616 129 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Mir3535-201ENSMUST00000197651 147 ntBASIC1.83□□□□□ -2.12
Nkx2-1P50220 Gm36189-201ENSMUST00000204113 523 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms