Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Rfx1P48377 Gm45558-201ENSMUST00000209384 1895 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 AC161250.2-201ENSMUST00000215114 3107 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
Rfx1P48377 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Rfx1P48377 Gm25915-201ENSMUST00000104265 126 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Gm12276-201ENSMUST00000121709 301 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Gm11414-201ENSMUST00000121795 263 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Gm25491-201ENSMUST00000158733 308 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Mir1966-201ENSMUST00000158807 108 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Gm20438-201ENSMUST00000174441 329 ntBASIC3.45□□□□□ -1.86
Rfx1P48377 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Rfx1P48377 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Rfx1P48377 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Rfx1P48377 Gm24263-201ENSMUST00000104059 107 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 Gm12412-201ENSMUST00000121867 328 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.44□□□□□ -1.86
Rfx1P48377 AC125167.1-201ENSMUST00000198698 141 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Rfx1P48377 AC122465.2-201ENSMUST00000221774 354 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 Gm25199-201ENSMUST00000083095 104 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 Mir29c-201ENSMUST00000083614 88 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.44□□□□□ -1.86
Rfx1P48377 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Rfx1P48377 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm26150-201ENSMUST00000157426 151 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm22557-201ENSMUST00000157804 102 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm24304-201ENSMUST00000177635 107 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm18546-201ENSMUST00000197245 676 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm15235-201ENSMUST00000200572 194 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm44223-201ENSMUST00000204854 114 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Gm19118-201ENSMUST00000222554 98 ntBASIC3.43□□□□□ -1.86
Rfx1P48377 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Rfx1P48377 Gm22535-201ENSMUST00000158174 119 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm23409-201ENSMUST00000158516 237 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm27330-201ENSMUST00000184689 132 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm37377-201ENSMUST00000191733 304 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm37081-201ENSMUST00000192034 196 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm36776-201ENSMUST00000207006 203 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.42□□□□□ -1.86
Rfx1P48377 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Rfx1P48377 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Rfx1P48377 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Rfx1P48377 Mir878-201ENSMUST00000104680 78 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm23655-201ENSMUST00000122627 105 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Rfx1P48377 Gm22187-201ENSMUST00000157819 129 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm20672-201ENSMUST00000176605 261 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm22510-201ENSMUST00000179304 79 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm26336-201ENSMUST00000179449 79 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm26297-201ENSMUST00000179464 132 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm26390-201ENSMUST00000179628 79 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm27700-201ENSMUST00000185003 81 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm37085-201ENSMUST00000193780 196 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm44491-201ENSMUST00000196794 96 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm43217-201ENSMUST00000199513 367 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.41□□□□□ -1.86
Rfx1P48377 Gm9765-201ENSMUST00000043170 321 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm23297-201ENSMUST00000083184 127 ntBASIC3.41□□□□□ -1.86
Rfx1P48377 Gm42635-201ENSMUST00000200266 2571 ntBASIC3.4□□□□□ -1.86
Rfx1P48377 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Rfx1P48377 Gm24118-201ENSMUST00000103972 126 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Gm25466-201ENSMUST00000103995 132 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Gm24627-201ENSMUST00000122764 138 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC3.4□□□□□ -1.87
Rfx1P48377 Gm24167-201ENSMUST00000177733 124 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Gm24028-201ENSMUST00000178991 124 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Gm23190-201ENSMUST00000180307 64 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Rfx1P48377 Gm44859-201ENSMUST00000207831 94 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.4□□□□□ -1.87
Rfx1P48377 AC168880.2-201ENSMUST00000224488 201 ntBASIC3.4□□□□□ -1.87
Rfx1P48377 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Rfx1P48377 Gm22148-201ENSMUST00000104445 107 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Gm6952-201ENSMUST00000118629 159 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Gm27851-201ENSMUST00000183529 63 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Gm29597-201ENSMUST00000188035 308 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.39□□□□□ -1.87
Rfx1P48377 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Gm22686-201ENSMUST00000082847 100 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Mir186-201ENSMUST00000083497 71 ntBASIC3.39□□□□□ -1.87
Rfx1P48377 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Rfx1P48377 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Rfx1P48377 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Rfx1P48377 n-R5s26-201ENSMUST00000104601 122 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Gm3788-201ENSMUST00000119949 136 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Gm22651-201ENSMUST00000157872 94 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Gm16546-201ENSMUST00000159442 355 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Snord53-201ENSMUST00000175146 78 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Snord93-201ENSMUST00000175580 71 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Gm27991-201ENSMUST00000184804 137 ntBASIC3.38□□□□□ -1.87
Rfx1P48377 Gm24536-201ENSMUST00000083144 107 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms