Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm45288-201ENSMUST00000210236 151 ntBASIC2.92□□□□□ -1.94
Usp4P35123 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.92□□□□□ -1.94
Usp4P35123 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp4P35123 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp4P35123 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp4P35123 Gm24480-201ENSMUST00000157442 103 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Gm22384-201ENSMUST00000158187 104 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Gm23268-201ENSMUST00000175494 78 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Mir1291-201ENSMUST00000199842 117 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Gm44903-201ENSMUST00000206840 130 ntBASIC2.91□□□□□ -1.94
Usp4P35123 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Snora34-201ENSMUST00000083402 138 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Gm21940-201ENSMUST00000204940 2278 ntBASIC2.91□□□□□ -1.94
Usp4P35123 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
Usp4P35123 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.9□□□□□ -1.94
Usp4P35123 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
Usp4P35123 Gm26341-201ENSMUST00000104561 134 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm24691-201ENSMUST00000157762 140 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Mir1951-201ENSMUST00000157981 89 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm20613-201ENSMUST00000175828 345 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm16404-201ENSMUST00000177739 468 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm25253-201ENSMUST00000179958 107 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm14598-201ENSMUST00000180109 468 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm14625-201ENSMUST00000180231 468 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm27505-201ENSMUST00000185071 110 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Usp4P35123 Gm43991-201ENSMUST00000203751 274 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm45445-201ENSMUST00000209586 232 ntBASIC2.9□□□□□ -1.95
Usp4P35123 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.9□□□□□ -1.95
Usp4P35123 AC168880.2-201ENSMUST00000224488 201 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.9□□□□□ -1.95
Usp4P35123 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usp4P35123 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usp4P35123 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
Usp4P35123 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Usp4P35123 Gm25466-201ENSMUST00000103995 132 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm22678-201ENSMUST00000116974 101 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm24896-201ENSMUST00000122741 135 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.89□□□□□ -1.95
Usp4P35123 Gm22476-201ENSMUST00000158902 100 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.89□□□□□ -1.95
Usp4P35123 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.89□□□□□ -1.95
Usp4P35123 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.89□□□□□ -1.95
Usp4P35123 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.89□□□□□ -1.95
Usp4P35123 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm24625-201ENSMUST00000082622 130 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm25142-201ENSMUST00000082698 107 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Gm23264-201ENSMUST00000083372 107 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Mir340-201ENSMUST00000083483 98 ntBASIC2.89□□□□□ -1.95
Usp4P35123 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usp4P35123 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Usp4P35123 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Usp4P35123 Gm22270-201ENSMUST00000104034 132 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm6954-201ENSMUST00000117416 225 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.88□□□□□ -1.95
Usp4P35123 Gm22553-201ENSMUST00000157797 295 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm23277-201ENSMUST00000157914 136 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm26403-201ENSMUST00000158500 105 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Mir28b-201ENSMUST00000175399 80 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.88□□□□□ -1.95
Usp4P35123 Gm43199-201ENSMUST00000200019 307 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm44024-201ENSMUST00000203008 476 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm44966-201ENSMUST00000208096 157 ntBASIC2.88□□□□□ -1.95
Usp4P35123 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Gm26126-201ENSMUST00000083188 164 ntBASIC2.88□□□□□ -1.95
Usp4P35123 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Usp4P35123 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.88□□□□□ -1.95
Usp4P35123 Mir344c-201ENSMUST00000103919 92 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm26473-201ENSMUST00000116763 127 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm12449-201ENSMUST00000117572 234 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm15214-201ENSMUST00000122155 470 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm24443-201ENSMUST00000157242 132 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm22651-201ENSMUST00000157872 94 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm27851-201ENSMUST00000183529 63 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Mir7050-201ENSMUST00000184636 60 ntBASIC2.87□□□□□ -1.95
Usp4P35123 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.87□□□□□ -1.95
Usp4P35123 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.87□□□□□ -1.95
Usp4P35123 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.87□□□□□ -1.95
Usp4P35123 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.87□□□□□ -1.95
Usp4P35123 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Gm10025-201ENSMUST00000079568 372 ntBASIC2.87□□□□□ -1.95
Usp4P35123 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usp4P35123 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usp4P35123 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usp4P35123 Gm24263-201ENSMUST00000104059 107 ntBASIC2.86□□□□□ -1.95
Usp4P35123 Gm26293-201ENSMUST00000104170 84 ntBASIC2.86□□□□□ -1.95
Usp4P35123 Gm26099-201ENSMUST00000157248 109 ntBASIC2.86□□□□□ -1.95
Usp4P35123 Gm24681-201ENSMUST00000158760 107 ntBASIC2.86□□□□□ -1.95
Usp4P35123 Gm24573-201ENSMUST00000175499 112 ntBASIC2.86□□□□□ -1.95
Usp4P35123 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2.86□□□□□ -1.95
Usp4P35123 Gm26458-201ENSMUST00000082832 128 ntBASIC2.86□□□□□ -1.95
Usp4P35123 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Usp4P35123 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usp4P35123 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Usp4P35123 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms