Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm44010-201ENSMUST00000204432 331 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm44960-201ENSMUST00000207403 141 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.52□□□□□ -2.17
Col2a1P28481 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Gm26314-201ENSMUST00000083891 107 ntBASIC1.52□□□□□ -2.17
Col2a1P28481 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Col2a1P28481 Gm24338-201ENSMUST00000104205 127 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm23202-201ENSMUST00000104376 129 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm6954-201ENSMUST00000117416 225 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm11388-201ENSMUST00000120908 159 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm25269-201ENSMUST00000122601 104 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.51□□□□□ -2.17
Col2a1P28481 Gm23331-201ENSMUST00000157423 108 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm24846-201ENSMUST00000158033 108 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm23636-201ENSMUST00000175070 95 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm22448-201ENSMUST00000179254 107 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29512-201ENSMUST00000185544 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28110-201ENSMUST00000185782 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29057-201ENSMUST00000186468 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29661-201ENSMUST00000186781 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28737-201ENSMUST00000186808 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29118-201ENSMUST00000186908 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28433-201ENSMUST00000187085 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28759-201ENSMUST00000187621 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28831-201ENSMUST00000187739 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm18357-201ENSMUST00000188184 580 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28752-201ENSMUST00000188340 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28569-201ENSMUST00000188748 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28120-201ENSMUST00000188812 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28369-201ENSMUST00000188993 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29037-201ENSMUST00000189092 313 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm28861-201ENSMUST00000189681 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29180-201ENSMUST00000190003 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29575-201ENSMUST00000190597 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm29469-201ENSMUST00000191448 315 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm42834-201ENSMUST00000196845 256 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm43680-201ENSMUST00000199466 340 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm43978-201ENSMUST00000203491 451 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.51□□□□□ -2.17
Col2a1P28481 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Col2a1P28481 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Col2a1P28481 Gm23451-201ENSMUST00000083328 122 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.51□□□□□ -2.17
Col2a1P28481 Gm14770-201ENSMUST00000122197 312 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24629-201ENSMUST00000122762 89 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm14298-201ENSMUST00000139032 237 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm16356-201ENSMUST00000143300 169 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24288-201ENSMUST00000157630 144 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm23083-201ENSMUST00000157851 116 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24005-201ENSMUST00000158459 296 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Mir6399-201ENSMUST00000184050 84 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.5□□□□□ -2.17
Col2a1P28481 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.5□□□□□ -2.17
Col2a1P28481 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm25793-201ENSMUST00000083287 107 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm25651-201ENSMUST00000083782 119 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm26329-201ENSMUST00000093723 110 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm15101-201ENSMUST00000178818 1502 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm10033-201ENSMUST00000072427 1813 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Mir465b-1-201ENSMUST00000103940 79 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Mir465b-2-201ENSMUST00000104662 79 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm13725-201ENSMUST00000122139 207 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24385-201ENSMUST00000122694 350 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Col2a1P28481 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24726-201ENSMUST00000158232 121 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm25012-201ENSMUST00000158396 164 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24878-201ENSMUST00000158782 104 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.5□□□□□ -2.17
Col2a1P28481 Gm22258-201ENSMUST00000177645 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm24388-201ENSMUST00000177872 107 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm26032-201ENSMUST00000178535 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm25210-201ENSMUST00000178813 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm25157-201ENSMUST00000178914 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm22046-201ENSMUST00000179027 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm22941-201ENSMUST00000179630 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm25471-201ENSMUST00000180126 94 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm27521-201ENSMUST00000184022 64 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Col2a1P28481 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.5□□□□□ -2.17
Col2a1P28481 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.5□□□□□ -2.17
Col2a1P28481 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 AC170600.1-201ENSMUST00000228763 277 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm23731-201ENSMUST00000083749 107 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Gm23040-201ENSMUST00000083869 163 ntBASIC1.5□□□□□ -2.17
Col2a1P28481 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC1.5□□□□□ -2.17
Col2a1P28481 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.5□□□□□ -2.17
Col2a1P28481 AC121844.2-201ENSMUST00000219067 2066 ntBASIC1.49□□□□□ -2.17
Col2a1P28481 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Col2a1P28481 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Col2a1P28481 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Col2a1P28481 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms