Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm24038-201ENSMUST00000082872 159 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm24261-201ENSMUST00000083744 104 ntBASIC0.97□□□□□ -2.25
Sdc1P18828 Gm26074-201ENSMUST00000104063 129 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC0.96□□□□□ -2.26
Sdc1P18828 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC0.96□□□□□ -2.26
Sdc1P18828 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC0.96□□□□□ -2.26
Sdc1P18828 Gm25805-201ENSMUST00000122788 108 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm25392-201ENSMUST00000157335 297 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm24777-201ENSMUST00000157644 107 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm24394-201ENSMUST00000158141 123 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm22447-201ENSMUST00000158155 92 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm23059-201ENSMUST00000158978 107 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC0.96□□□□□ -2.26
Sdc1P18828 Gm25958-201ENSMUST00000175114 71 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Mir5104-201ENSMUST00000175319 94 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm23660-201ENSMUST00000178362 79 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm24088-201ENSMUST00000179100 79 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm23191-201ENSMUST00000179147 107 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.96□□□□□ -2.26
Sdc1P18828 Gm43602-201ENSMUST00000196772 300 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm42834-201ENSMUST00000196845 256 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm42719-201ENSMUST00000197393 355 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 AC125020.2-201ENSMUST00000218894 348 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 AC122905.2-201ENSMUST00000220325 269 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Snora41-201ENSMUST00000082668 132 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm22685-201ENSMUST00000082848 106 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm3867-201ENSMUST00000086108 279 ntBASIC0.96□□□□□ -2.26
Sdc1P18828 Gm15102-201ENSMUST00000118740 1502 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm15101-201ENSMUST00000178818 1502 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm22279-201ENSMUST00000157200 93 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm25434-201ENSMUST00000158278 167 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
Sdc1P18828 Gm18291-201ENSMUST00000190791 301 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm45268-201ENSMUST00000210046 370 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 AC104832.1-201ENSMUST00000222938 550 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm24966-201ENSMUST00000082443 79 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm23627-201ENSMUST00000082459 107 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm22502-201ENSMUST00000082488 107 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm22977-201ENSMUST00000082615 107 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm24149-201ENSMUST00000082757 107 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Gm25128-201ENSMUST00000083339 76 ntBASIC0.95□□□□□ -2.26
Sdc1P18828 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Sdc1P18828 Gm10033-201ENSMUST00000072427 1813 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm23951-201ENSMUST00000104029 132 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm23010-201ENSMUST00000104151 126 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Sdc1P18828 Gm14782-201ENSMUST00000120151 195 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm22477-201ENSMUST00000122569 316 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC0.94□□□□□ -2.26
Sdc1P18828 Gm26089-201ENSMUST00000157898 107 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm24808-201ENSMUST00000157993 118 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm22403-201ENSMUST00000174919 84 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm27539-201ENSMUST00000184971 224 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Gm45296-201ENSMUST00000209625 205 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 AL935138.1-201ENSMUST00000215309 196 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 AC126672.1-201ENSMUST00000217096 396 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.94□□□□□ -2.26
Sdc1P18828 Gm18617-201ENSMUST00000222311 259 ntBASIC0.94□□□□□ -2.26
Sdc1P18828 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Sdc1P18828 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.93□□□□□ -2.26
Sdc1P18828 Gm11859-201ENSMUST00000118099 455 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC0.93□□□□□ -2.26
Sdc1P18828 Gm25909-201ENSMUST00000157619 121 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm23122-201ENSMUST00000157645 103 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm25884-201ENSMUST00000157782 62 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm24853-201ENSMUST00000158026 121 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm24277-201ENSMUST00000158661 104 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm27236-201ENSMUST00000184147 442 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Mir7062-201ENSMUST00000185038 66 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm37399-201ENSMUST00000195224 416 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm42855-201ENSMUST00000197388 253 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm43220-201ENSMUST00000199299 282 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm26224-201ENSMUST00000082506 80 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm22306-201ENSMUST00000082692 107 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm23055-201ENSMUST00000082805 94 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm23721-201ENSMUST00000083005 107 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Mir155-201ENSMUST00000083463 65 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Gm25513-201ENSMUST00000083861 162 ntBASIC0.93□□□□□ -2.26
Sdc1P18828 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Sdc1P18828 Gm14882-201ENSMUST00000117216 218 ntBASIC0.92□□□□□ -2.26
Sdc1P18828 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.92□□□□□ -2.26
Sdc1P18828 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.92□□□□□ -2.26
Sdc1P18828 Gm25663-201ENSMUST00000157698 135 ntBASIC0.92□□□□□ -2.26
Sdc1P18828 Mir7026-201ENSMUST00000184384 67 ntBASIC0.92□□□□□ -2.26
Sdc1P18828 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.92□□□□□ -2.26
Sdc1P18828 Gm23013-201ENSMUST00000104146 106 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm15443-201ENSMUST00000118947 820 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm12433-201ENSMUST00000119659 255 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.91□□□□□ -2.26
Sdc1P18828 Gm16358-201ENSMUST00000146046 210 ntBASIC0.91□□□□□ -2.26
Sdc1P18828 Gm22233-201ENSMUST00000157464 114 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms