Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Mir344-201ENSMUST00000083634 95 ntBASIC0.94□□□□□ -2.26
Cdx1P18111 Gm26108-201ENSMUST00000083973 191 ntBASIC0.94□□□□□ -2.26
Cdx1P18111 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.94□□□□□ -2.26
Cdx1P18111 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.94□□□□□ -2.26
Cdx1P18111 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.94□□□□□ -2.26
Cdx1P18111 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Cdx1P18111 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm23836-201ENSMUST00000104434 129 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm14917-201ENSMUST00000118872 2105 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm25559-201ENSMUST00000157182 74 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm24438-201ENSMUST00000157893 115 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm23411-201ENSMUST00000157988 62 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm22425-201ENSMUST00000158532 138 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm17052-201ENSMUST00000165496 289 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm27271-201ENSMUST00000183509 170 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm27957-201ENSMUST00000184054 127 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm27919-201ENSMUST00000185163 107 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.93□□□□□ -2.26
Cdx1P18111 Gm37399-201ENSMUST00000195224 416 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm5034-201ENSMUST00000199115 634 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm18188-201ENSMUST00000219386 478 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Gm20102-201ENSMUST00000222445 220 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Cdx1P18111 Gm26314-201ENSMUST00000083891 107 ntBASIC0.93□□□□□ -2.26
Cdx1P18111 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Cdx1P18111 Gm22834-201ENSMUST00000102021 79 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm15443-201ENSMUST00000118947 820 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm11512-201ENSMUST00000119669 663 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm12770-201ENSMUST00000121734 462 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm22477-201ENSMUST00000122569 316 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm24409-201ENSMUST00000157881 152 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm26089-201ENSMUST00000157898 107 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm22565-201ENSMUST00000175540 69 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm27420-201ENSMUST00000183823 79 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC0.92□□□□□ -2.26
Cdx1P18111 Gm28597-201ENSMUST00000187664 666 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Cdx1P18111 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Cdx1P18111 AC162387.1-201ENSMUST00000213369 213 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 AL772265.1-201ENSMUST00000214379 305 ntBASIC0.92□□□□□ -2.26
Cdx1P18111 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.91□□□□□ -2.26
Cdx1P18111 Gm24630-201ENSMUST00000122768 106 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Mir5104-201ENSMUST00000175319 94 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Gm27313-201ENSMUST00000183500 142 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Cdx1P18111 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Cdx1P18111 Gm44458-201ENSMUST00000196594 143 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.91□□□□□ -2.26
Cdx1P18111 Gm23299-201ENSMUST00000082708 79 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Mir196b-201ENSMUST00000083509 85 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Mir211-201ENSMUST00000083651 106 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Gm25409-201ENSMUST00000083764 131 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Snord35a-201ENSMUST00000083884 90 ntBASIC0.91□□□□□ -2.26
Cdx1P18111 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Cdx1P18111 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Cdx1P18111 Gm22935-201ENSMUST00000103960 104 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm24431-201ENSMUST00000104073 66 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm13475-201ENSMUST00000119290 234 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm25768-201ENSMUST00000158570 98 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm23059-201ENSMUST00000158978 107 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm27640-201ENSMUST00000184580 147 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm42834-201ENSMUST00000196845 256 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm43487-201ENSMUST00000200331 1031 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 AC164161.1-201ENSMUST00000214076 639 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 AC120394.1-201ENSMUST00000217153 351 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm45815-201ENSMUST00000220241 146 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 AC173345.2-201ENSMUST00000222795 153 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 AC183092.1-201ENSMUST00000224301 153 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm23515-201ENSMUST00000082829 107 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm24038-201ENSMUST00000082872 159 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm24261-201ENSMUST00000083744 104 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm23347-201ENSMUST00000083823 82 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Gm25683-201ENSMUST00000083940 131 ntBASIC0.9□□□□□ -2.27
Cdx1P18111 Mir872-201ENSMUST00000104728 81 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Gm14803-201ENSMUST00000117163 361 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Gm22281-201ENSMUST00000157198 103 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Gm22841-201ENSMUST00000158443 62 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Gm24577-201ENSMUST00000158580 63 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Gm18588-201ENSMUST00000177308 492 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Mir7063-201ENSMUST00000184158 91 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.89□□□□□ -2.27
Cdx1P18111 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.89□□□□□ -2.27
Cdx1P18111 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 AC114916.1-201ENSMUST00000228465 494 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.89□□□□□ -2.27
Cdx1P18111 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Cdx1P18111 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Cdx1P18111 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Cdx1P18111 Gm14293-201ENSMUST00000118528 577 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Gm13729-201ENSMUST00000120328 406 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Gm14922-201ENSMUST00000121131 163 ntBASIC0.88□□□□□ -2.27
Cdx1P18111 Gm24393-201ENSMUST00000158135 97 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 962.7 ms