Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Scarna8-201ENSMUST00000158333 131 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm25956-201ENSMUST00000175115 217 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm18396-201ENSMUST00000177095 361 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm27943-201ENSMUST00000184844 116 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm10193-201ENSMUST00000188288 231 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm45658-201ENSMUST00000209197 580 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.16□□□□□ -2.38
Col1a1P11087 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Mir452-201ENSMUST00000093629 85 ntBASIC0.16□□□□□ -2.38
Col1a1P11087 Mir672-201ENSMUST00000102331 100 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm22706-201ENSMUST00000157907 112 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm24296-201ENSMUST00000158297 106 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC0.15□□□□□ -2.39
Col1a1P11087 Gm22290-201ENSMUST00000177655 107 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm5116-201ENSMUST00000187732 463 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm29627-201ENSMUST00000187984 463 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.15□□□□□ -2.39
Col1a1P11087 Gm34073-201ENSMUST00000195736 212 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm29848-201ENSMUST00000203107 295 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC0.15□□□□□ -2.39
Col1a1P11087 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm26326-201ENSMUST00000083070 129 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm24256-201ENSMUST00000083696 84 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Gm10780-201ENSMUST00000099459 285 ntBASIC0.15□□□□□ -2.39
Col1a1P11087 Mir574-201ENSMUST00000103854 78 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm26249-201ENSMUST00000116708 118 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm24481-201ENSMUST00000157210 102 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm22087-201ENSMUST00000158339 88 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm24168-201ENSMUST00000178825 107 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm42719-201ENSMUST00000197393 355 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm18113-201ENSMUST00000220630 303 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.14□□□□□ -2.39
Col1a1P11087 Gm24372-201ENSMUST00000104400 110 ntBASIC0.13□□□□□ -2.39
Col1a1P11087 Gm13967-201ENSMUST00000120404 380 ntBASIC0.13□□□□□ -2.39
Col1a1P11087 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
Col1a1P11087 Gm28257-201ENSMUST00000185244 463 ntBASIC0.13□□□□□ -2.39
Col1a1P11087 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC0.13□□□□□ -2.39
Col1a1P11087 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Col1a1P11087 Gm22685-201ENSMUST00000082848 106 ntBASIC0.13□□□□□ -2.39
Col1a1P11087 Gm24535-201ENSMUST00000083140 107 ntBASIC0.13□□□□□ -2.39
Col1a1P11087 Gm26339-201ENSMUST00000102368 99 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Col1a1P11087 Gm22942-201ENSMUST00000158563 124 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm23387-201ENSMUST00000158586 107 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm25162-201ENSMUST00000158906 159 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm23777-201ENSMUST00000158994 259 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm7925-201ENSMUST00000166690 401 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
Col1a1P11087 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm34783-201ENSMUST00000209159 303 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Col1a1P11087 Snord95-201ENSMUST00000082846 68 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Mir411-201ENSMUST00000083543 82 ntBASIC0.12□□□□□ -2.39
Col1a1P11087 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC0.12□□□□□ -2.39
Col1a1P11087 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
Col1a1P11087 Gm15529-201ENSMUST00000121833 994 ntBASIC0.11□□□□□ -2.39
Col1a1P11087 Gm13368-201ENSMUST00000122443 430 ntBASIC0.11□□□□□ -2.39
Col1a1P11087 Gm22983-201ENSMUST00000158308 104 ntBASIC0.11□□□□□ -2.39
Col1a1P11087 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC0.11□□□□□ -2.39
Col1a1P11087 Snora16a-202ENSMUST00000196061 137 ntBASIC0.11□□□□□ -2.39
Col1a1P11087 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC0.11□□□□□ -2.39
Col1a1P11087 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.11□□□□□ -2.39
Col1a1P11087 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.11□□□□□ -2.39
Col1a1P11087 Gm11859-201ENSMUST00000118099 455 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm14599-201ENSMUST00000120469 474 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm23118-201ENSMUST00000122657 187 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm24960-201ENSMUST00000157923 90 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm25413-201ENSMUST00000158544 312 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.1□□□□□ -2.39
Col1a1P11087 Mir6365-201ENSMUST00000183990 101 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm7654-201ENSMUST00000186738 683 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC0.1□□□□□ -2.39
Col1a1P11087 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.1□□□□□ -2.39
Col1a1P11087 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.1□□□□□ -2.39
Col1a1P11087 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.1□□□□□ -2.39
Col1a1P11087 Mir324-201ENSMUST00000083600 89 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm22577-201ENSMUST00000083731 109 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm25047-201ENSMUST00000122667 104 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm22339-201ENSMUST00000157718 62 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm22114-201ENSMUST00000177756 107 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC0.1□□□□□ -2.39
Col1a1P11087 Gm27475-201ENSMUST00000183420 61 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Mir7065-201ENSMUST00000185110 61 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm44921-201ENSMUST00000205290 301 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm25799-201ENSMUST00000082643 107 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Gm23690-201ENSMUST00000083036 94 ntBASIC0.1□□□□□ -2.39
Col1a1P11087 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.09□□□□□ -2.39
Col1a1P11087 Gm24587-201ENSMUST00000116697 89 ntBASIC0.09□□□□□ -2.4
Col1a1P11087 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC0.09□□□□□ -2.4
Col1a1P11087 Mir3079-201ENSMUST00000175428 90 ntBASIC0.09□□□□□ -2.4
Col1a1P11087 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.09□□□□□ -2.4
Col1a1P11087 Gm6003-201ENSMUST00000187903 463 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms