Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm24038-201ENSMUST00000082872 159 ntBASIC0.35□□□□□ -2.35
TcraP01849 Gm24920-201ENSMUST00000083018 85 ntBASIC0.35□□□□□ -2.35
TcraP01849 Gm24490-201ENSMUST00000083803 98 ntBASIC0.35□□□□□ -2.35
TcraP01849 Gm4746-201ENSMUST00000120395 2406 ntBASIC0.35□□□□□ -2.35
TcraP01849 Gm22591-201ENSMUST00000104243 106 ntBASIC0.34□□□□□ -2.36
TcraP01849 Gm13729-201ENSMUST00000120328 406 ntBASIC0.34□□□□□ -2.36
TcraP01849 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC0.34□□□□□ -2.36
TcraP01849 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC0.34□□□□□ -2.36
TcraP01849 Gm9593-201ENSMUST00000166034 469 ntBASIC0.34□□□□□ -2.36
TcraP01849 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.34□□□□□ -2.36
TcraP01849 Mir6540-201ENSMUST00000184886 108 ntBASIC0.34□□□□□ -2.36
TcraP01849 Gm29352-201ENSMUST00000188054 544 ntBASIC0.34□□□□□ -2.36
TcraP01849 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC0.34□□□□□ -2.36
TcraP01849 Gm28408-201ENSMUST00000191557 463 ntBASIC0.34□□□□□ -2.36
TcraP01849 AC124346.1-201ENSMUST00000218539 364 ntBASIC0.34□□□□□ -2.36
TcraP01849 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.34□□□□□ -2.36
TcraP01849 Gm23731-201ENSMUST00000083749 107 ntBASIC0.34□□□□□ -2.36
TcraP01849 Gm26314-201ENSMUST00000083891 107 ntBASIC0.34□□□□□ -2.36
TcraP01849 Snord71-201ENSMUST00000104361 85 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm14007-201ENSMUST00000118288 210 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm25750-201ENSMUST00000175483 112 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
TcraP01849 Gm27817-201ENSMUST00000184302 233 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm28921-201ENSMUST00000190219 378 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm43432-201ENSMUST00000196352 121 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm44976-201ENSMUST00000205543 261 ntBASIC0.33□□□□□ -2.36
TcraP01849 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.33□□□□□ -2.36
TcraP01849 AC130821.1-201ENSMUST00000221997 293 ntBASIC0.33□□□□□ -2.36
TcraP01849 AC117656.1-201ENSMUST00000225826 339 ntBASIC0.33□□□□□ -2.36
TcraP01849 AC156790.3-201ENSMUST00000226200 254 ntBASIC0.33□□□□□ -2.36
TcraP01849 Mir16-2-201ENSMUST00000083672 95 ntBASIC0.33□□□□□ -2.36
TcraP01849 Gm37642-201ENSMUST00000193166 1735 ntBASIC0.33□□□□□ -2.36
TcraP01849 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TcraP01849 Gm22935-201ENSMUST00000103960 104 ntBASIC0.32□□□□□ -2.36
TcraP01849 Mir190b-201ENSMUST00000104803 80 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm14803-201ENSMUST00000117163 361 ntBASIC0.32□□□□□ -2.36
TcraP01849 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC0.32□□□□□ -2.36
TcraP01849 Gm26149-201ENSMUST00000157432 108 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm24191-201ENSMUST00000157977 122 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm24678-201ENSMUST00000158756 104 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm26501-201ENSMUST00000178307 107 ntBASIC0.32□□□□□ -2.36
TcraP01849 Mir6364-201ENSMUST00000183396 86 ntBASIC0.32□□□□□ -2.36
TcraP01849 Mir195b-201ENSMUST00000184814 97 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm44325-201ENSMUST00000196757 77 ntBASIC0.32□□□□□ -2.36
TcraP01849 Gm32300-201ENSMUST00000221735 515 ntBASIC0.32□□□□□ -2.36
TcraP01849 DQ267101-201ENSMUST00000082562 73 ntBASIC0.32□□□□□ -2.36
TcraP01849 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TcraP01849 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
TcraP01849 Gm24517-201ENSMUST00000122560 107 ntBASIC0.31□□□□□ -2.36
TcraP01849 Defb44-ps-201ENSMUST00000126871 219 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm26278-201ENSMUST00000157098 132 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm22796-201ENSMUST00000157234 106 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm26484-201ENSMUST00000158018 106 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm23340-201ENSMUST00000158955 123 ntBASIC0.31□□□□□ -2.36
TcraP01849 Mir15a-201ENSMUST00000175266 84 ntBASIC0.31□□□□□ -2.36
TcraP01849 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm22851-201ENSMUST00000178741 94 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm25074-201ENSMUST00000178782 94 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm28848-201ENSMUST00000189984 168 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm38060-201ENSMUST00000194822 464 ntBASIC0.31□□□□□ -2.36
TcraP01849 Gm44465-201ENSMUST00000199536 114 ntBASIC0.31□□□□□ -2.36
TcraP01849 AC153141.1-201ENSMUST00000218636 501 ntBASIC0.31□□□□□ -2.36
TcraP01849 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC0.31□□□□□ -2.36
TcraP01849 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.31□□□□□ -2.36
TcraP01849 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.31□□□□□ -2.36
TcraP01849 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC0.31□□□□□ -2.36
TcraP01849 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm11794-201ENSMUST00000119446 237 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm14922-201ENSMUST00000121131 163 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm22281-201ENSMUST00000157198 103 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm22733-201ENSMUST00000158094 91 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm26358-201ENSMUST00000158215 97 ntBASIC0.3□□□□□ -2.36
TcraP01849 Zfp950-206ENSMUST00000178819 171 ntBASIC0.3□□□□□ -2.36
TcraP01849 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC0.3□□□□□ -2.36
TcraP01849 Gm34015-201ENSMUST00000194908 451 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm44462-201ENSMUST00000199696 129 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm43810-201ENSMUST00000201018 232 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm25404-201ENSMUST00000082970 107 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm22578-201ENSMUST00000083730 107 ntBASIC0.3□□□□□ -2.36
TcraP01849 Gm25513-201ENSMUST00000083861 162 ntBASIC0.3□□□□□ -2.36
TcraP01849 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
TcraP01849 Gm25378-201ENSMUST00000104333 129 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm26303-201ENSMUST00000116845 119 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm11512-201ENSMUST00000119669 663 ntBASIC0.29□□□□□ -2.36
TcraP01849 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TcraP01849 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
TcraP01849 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.29□□□□□ -2.36
TcraP01849 Snord116l12-201ENSMUST00000179816 94 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm27289-201ENSMUST00000183341 82 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm27236-201ENSMUST00000184147 442 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm28661-201ENSMUST00000188231 681 ntBASIC0.29□□□□□ -2.36
TcraP01849 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm45315-201ENSMUST00000209283 333 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm29817-201ENSMUST00000210098 172 ntBASIC0.29□□□□□ -2.36
TcraP01849 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.29□□□□□ -2.36
TcraP01849 Gm22884-201ENSMUST00000083127 140 ntBASIC0.29□□□□□ -2.36
TcraP01849 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC0.28□□□□□ -2.36
TcraP01849 Gm25820-201ENSMUST00000198589 127 ntBASIC0.28□□□□□ -2.36
TcraP01849 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms